RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 PEX1O43933 1283 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 TXNP10599 105 aaKnown RBP5.72□□□□□ -1.49
CPSF2-201ENST00000298875 TUBB3Q13509 450 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 DDR2Q16832 855 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 FAM117BQ6P1L5 589 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 C4orf22Q6V702 233 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 ZNF677Q86XU0 584 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 EPHX4Q8IUS5 362 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 L3MBTL3Q96JM7 780 aaPredicted RBP5.72□□□□□ -1.49
CPSF2-201ENST00000298875 SH3BP1Q9Y3L3 701 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 KIF1AQ12756 1690 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 CCDC162PA2VCL2 907 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 ADCY6O43306 1168 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 CD4P01730 458 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 TMEM253P0C7T8 217 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 GSSP48637 474 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 CCT8P50990 548 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 FXR1P51114 621 aaKnown RBP eCLIP5.72□□□□□ -1.49
CPSF2-201ENST00000298875 SPIDRQ14159 915 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 DDI2Q5TDH0 399 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 OOSP2Q86WS3 158 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 KBTBD8Q8NFY9 601 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 RPS6KL1Q9Y6S9 549 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 UPP2O95045 317 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 GYPCP04921 128 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 NPEPPSP55786 919 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 INHBEP58166 350 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 EPC2Q52LR7 807 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 ARMC4Q5T2S8 1044 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 FEZF2Q8TBJ5 459 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 HPDLQ96IR7 371 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 R3HDM2Q9Y2K5 976 aaKnown RBP5.72□□□□□ -1.49
CPSF2-201ENST00000298875 TMA7Q9Y2S6 64 aaKnown RBP5.72□□□□□ -1.49
CPSF2-201ENST00000298875 VIRMAQ69YN4 1812 aaKnown RBP5.72□□□□□ -1.49
CPSF2-201ENST00000298875 KBTBD13C9JR72 458 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 PTGER2P43116 358 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 KCNJ1P48048 391 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 GCLCP48506 637 aaPredicted RBP5.72□□□□□ -1.49
CPSF2-201ENST00000298875 YWHAZP63104 245 aaKnown RBP5.72□□□□□ -1.49
CPSF2-201ENST00000298875 EPHA10Q5JZY3 1008 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 TMEM63BQ5T3F8 832 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 TRIM48Q8IWZ4 208 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 FIG4Q92562 907 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 PNKPQ96T60 521 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 BCL2L14Q9BZR8 327 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 PHACTR1Q9C0D0 580 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 CYP4F12Q9HCS2 524 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 ADGRB2O60241 1585 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 GSG1L2A8MUP6 293 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 IL6P05231 212 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 RPLP2P05387 115 aaKnown RBP5.72□□□□□ -1.49
CPSF2-201ENST00000298875 ZNF12P17014 697 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 CALB2P22676 271 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 HMGCS2P54868 508 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 C11orf63Q6NUN7 778 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 B3GNT6Q6ZMB0 384 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 MED8Q96G25 268 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 ERAP1Q9NZ08 941 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 NRXN1Q9ULB1 1477 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 C1orf232A0A0U1RR37 186 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 PLA2G6O60733 806 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 NPTXRO95502 500 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 HLA-DRAP01903 254 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 TKTP29401 623 aaKnown RBP5.72□□□□□ -1.49
CPSF2-201ENST00000298875 FAXCQ5TGI0 409 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 TRAPPC11Q7Z392 1133 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 COMMD2Q86X83 199 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 REXO1L1PQ8IX06 675 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 SETD9Q8NE22 299 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 NOL6Q9H6R4 1146 aaKnown RBP5.72□□□□□ -1.49
CPSF2-201ENST00000298875 CYP39A1Q9NYL5 469 aa5.72□□□□□ -1.49
CPSF2-201ENST00000298875 CNOT3O75175 753 aaKnown RBP5.71□□□□□ -1.49
CPSF2-201ENST00000298875 PMPCBO75439 489 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 CHRNB3Q05901 458 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 SEL1L3Q68CR1 1132 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 CCDC126Q96EE4 140 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 FAM58BPP0C7Q3 252 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 THRAP10827 490 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 OR1G1P47890 313 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 GSTA3Q16772 222 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 EFHC1Q5JVL4 640 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 COL23A1Q86Y22 540 aaPredicted RBP5.71□□□□□ -1.49
CPSF2-201ENST00000298875 TC2NQ8N9U0 490 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 KATNAL1Q9BW62 490 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 CEP44Q9C0F1 390 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 SPACA6W5XKT8 324 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 IGSF9BQ9UPX0 1349 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 RPS6KA4O75676 772 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 STAU1O95793 577 aaKnown RBP5.71□□□□□ -1.49
CPSF2-201ENST00000298875 MMP10P09238 476 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 NOS3P29474 1203 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 CDH18Q13634 790 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 PDIA5Q14554 519 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 NAIF1Q69YI7 327 aaPredicted RBP5.71□□□□□ -1.49
CPSF2-201ENST00000298875 SGMS1Q86VZ5 419 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 STK39Q9UEW8 545 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 PCDHB7Q9Y5E2 793 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 ABCA6Q8N139 1617 aa5.71□□□□□ -1.49
CPSF2-201ENST00000298875 MTSS1O43312 755 aa5.71□□□□□ -1.5
CPSF2-201ENST00000298875 VPS26AO75436 327 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms