RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 PDE6CP51160 858 aa16.6■□□□□ 0.25
UBXN1-201ENST00000294119 NCKAP1LP55160 1127 aa16.6■□□□□ 0.25
UBXN1-201ENST00000294119 RPL10AP62906 217 aaKnown RBP16.6■□□□□ 0.25
UBXN1-201ENST00000294119 NFE2Q16621 373 aaPredicted RBP16.6■□□□□ 0.25
UBXN1-201ENST00000294119 COLEC12Q5KU26 742 aa16.6■□□□□ 0.25
UBXN1-201ENST00000294119 ERICH1Q86X53 443 aa16.6■□□□□ 0.25
UBXN1-201ENST00000294119 METTL23Q86XA0 190 aa16.6■□□□□ 0.25
UBXN1-201ENST00000294119 TMEM161BQ8NDZ6 487 aa16.6■□□□□ 0.25
UBXN1-201ENST00000294119 ERCC4Q92889 916 aaPredicted RBP16.6■□□□□ 0.25
UBXN1-201ENST00000294119 FUCA2Q9BTY2 467 aa16.6■□□□□ 0.25
UBXN1-201ENST00000294119 PCDHB13Q9Y5F0 798 aa16.6■□□□□ 0.25
UBXN1-201ENST00000294119 MYLKQ15746 1914 aa16.6■□□□□ 0.25
UBXN1-201ENST00000294119 BIN1O00499 593 aa16.59■□□□□ 0.25
UBXN1-201ENST00000294119 CYB561D2O14569 222 aa16.59■□□□□ 0.25
UBXN1-201ENST00000294119 SLC9A3R1O14745 358 aaPredicted RBP16.59■□□□□ 0.25
UBXN1-201ENST00000294119 SLC16A4O15374 487 aa16.59■□□□□ 0.25
UBXN1-201ENST00000294119 ADH1CP00326 375 aa16.59■□□□□ 0.25
UBXN1-201ENST00000294119 CYP2F1P24903 491 aa16.59■□□□□ 0.25
UBXN1-201ENST00000294119 SUZ12Q15022 739 aaKnown RBP16.59■□□□□ 0.25
UBXN1-201ENST00000294119 PREPLQ4J6C6 727 aaPredicted RBP16.59■□□□□ 0.25
UBXN1-201ENST00000294119 TERB1Q8NA31 727 aa16.59■□□□□ 0.25
UBXN1-201ENST00000294119 SNRNP27Q8WVK2 155 aaKnown RBP16.59■□□□□ 0.25
UBXN1-201ENST00000294119 TMEM176AQ96HP8 235 aa16.59■□□□□ 0.25
UBXN1-201ENST00000294119 TSPY26PQ9H489 355 aa16.59■□□□□ 0.25
UBXN1-201ENST00000294119 ST6GALNAC4Q9H4F1 302 aa16.59■□□□□ 0.25
UBXN1-201ENST00000294119 MRPL44Q9H9J2 332 aaKnown RBP16.59■□□□□ 0.25
UBXN1-201ENST00000294119 USP36Q9P275 1121 aaKnown RBP16.59■□□□□ 0.25
UBXN1-201ENST00000294119 SPTAN1Q13813 2472 aaKnown RBP16.59■□□□□ 0.25
UBXN1-201ENST00000294119 MYH11P35749 1972 aa16.58■□□□□ 0.25
UBXN1-201ENST00000294119 TBC1D3BA6NDS4 549 aa16.58■□□□□ 0.24
UBXN1-201ENST00000294119 TRIM66O15016 1216 aa16.58■□□□□ 0.24
UBXN1-201ENST00000294119 EIF3DO15371 548 aaKnown RBP eCLIP16.58■□□□□ 0.24
UBXN1-201ENST00000294119 HOXC11O43248 304 aaPredicted RBP16.58■□□□□ 0.24
UBXN1-201ENST00000294119 PAPSS1O43252 624 aaPredicted RBP16.58■□□□□ 0.24
UBXN1-201ENST00000294119 SLC28A2O43868 658 aa16.58■□□□□ 0.24
UBXN1-201ENST00000294119 CFAP221Q4G0U5 840 aa16.58■□□□□ 0.24
UBXN1-201ENST00000294119 JADE1Q6IE81 842 aa16.58■□□□□ 0.24
UBXN1-201ENST00000294119 SFR1Q86XK3 245 aa16.58■□□□□ 0.24
UBXN1-201ENST00000294119 GUF1Q8N442 669 aaKnown RBP16.58■□□□□ 0.24
UBXN1-201ENST00000294119 HVCN1Q96D96 273 aa16.58■□□□□ 0.24
UBXN1-201ENST00000294119 ACOX2Q99424 681 aa16.58■□□□□ 0.24
UBXN1-201ENST00000294119 RNF38Q9H0F5 515 aa16.58■□□□□ 0.24
UBXN1-201ENST00000294119 SLC6A17Q9H1V8 727 aa16.58■□□□□ 0.24
UBXN1-201ENST00000294119 UBE4BO95155 1302 aa16.58■□□□□ 0.24
UBXN1-201ENST00000294119 MEI4A8MW99 385 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 PSMA7O14818 248 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 TULP3O75386 442 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 NCAM1P13591 858 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 ERCC5P28715 1186 aaPredicted RBP16.57■□□□□ 0.24
UBXN1-201ENST00000294119 HNF1BP35680 557 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 WASP42768 502 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 CLDN6P56747 220 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 KCNH2Q12809 1159 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 LY6DQ14210 128 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 LY6G5CQ5SRR4 150 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 EGFLAMQ63HQ2 1017 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 FOXR2Q6PJQ5 311 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 ZNF720Q7Z2F6 126 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 TOE1Q96GM8 510 aaKnown RBP16.57■□□□□ 0.24
UBXN1-201ENST00000294119 DHTKD1Q96HY7 919 aaPredicted RBP16.57■□□□□ 0.24
UBXN1-201ENST00000294119 IL17BQ9UHF5 180 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 DERAQ9Y315 318 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 AK5Q9Y6K8 562 aa16.57■□□□□ 0.24
UBXN1-201ENST00000294119 A0A1B0GVT2 93 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 METTL12A8MUP2 240 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 K7ENM7 598 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 JUPP14923 745 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 TAF6P49848 677 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 GTF2BQ00403 316 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 TSPY1Q01534 308 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 GAD2Q05329 585 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 STK4Q13043 487 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 TARDBPQ13148 414 aaKnown RBP eCLIP16.56■□□□□ 0.24
UBXN1-201ENST00000294119 KYAT1Q16773 422 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 KIF19Q2TAC6 998 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 C10orf76Q5T2E6 689 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 DCAF12L1Q5VU92 463 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 CD302Q8IX05 232 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 ZNF507Q8TCN5 953 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 MED8Q96G25 268 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 DUSP9Q99956 384 aaKnown RBP16.56■□□□□ 0.24
UBXN1-201ENST00000294119 BPIFA3Q9BQP9 254 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 ACBD6Q9BR61 282 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 SLC39A2Q9NP94 309 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 SLCO1B1Q9Y6L6 691 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 ANKRD17O75179 2603 aaKnown RBP16.56■□□□□ 0.24
UBXN1-201ENST00000294119 AHCTF1Q8WYP5 2266 aa16.56■□□□□ 0.24
UBXN1-201ENST00000294119 LRRK2Q5S007 2527 aa16.55■□□□□ 0.24
UBXN1-201ENST00000294119 BICDL2A1A5D9 508 aa16.55■□□□□ 0.24
UBXN1-201ENST00000294119 SCAMP3O14828 347 aaKnown RBP16.55■□□□□ 0.24
UBXN1-201ENST00000294119 BRINP1O60477 761 aa16.55■□□□□ 0.24
UBXN1-201ENST00000294119 GCNT3O95395 438 aa16.55■□□□□ 0.24
UBXN1-201ENST00000294119 OAS1P00973 400 aaKnown RBP16.55■□□□□ 0.24
UBXN1-201ENST00000294119 IGLV3-19P01714 112 aa16.55■□□□□ 0.24
UBXN1-201ENST00000294119 CDK4P11802 303 aa16.55■□□□□ 0.24
UBXN1-201ENST00000294119 BMP6P22004 513 aa16.55■□□□□ 0.24
UBXN1-201ENST00000294119 SNRPFP62306 86 aaKnown RBP16.55■□□□□ 0.24
UBXN1-201ENST00000294119 CCDC173Q0VFZ6 552 aa16.55■□□□□ 0.24
UBXN1-201ENST00000294119 BMT2Q1RMZ1 405 aa16.55■□□□□ 0.24
UBXN1-201ENST00000294119 TBC1D25Q3MII6 688 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms