RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 RBBP8NLQ8NC74 664 aaPredicted RBP12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 CPA5Q8WXQ8 436 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 JADE3Q92613 823 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 CDV3Q9UKY7 258 aaKnown RBP12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 CAPN6Q9Y6Q1 641 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 A0A087X0T9 212 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 UBOX5O94941 541 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 APOA4P06727 396 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 FAM228BP0C875 321 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 KLK7P49862 253 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 CCL23P55773 120 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 NKX3-2P78367 333 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 LAMB3Q13751 1172 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 KRT72Q14CN4 511 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 PTPAQ15257 358 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 C1orf53Q5VUE5 145 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 LRRC6Q86X45 466 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 INPP5DQ92835 1189 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 RXFP1Q9HBX9 757 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 CASS4Q9NQ75 786 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 RGL1Q9NZL6 768 aa12.24□□□□□ -0.45
SYNGAP1-201ENST00000293748 A8MXQ7 604 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 TRIM49D1C9J1S8 452 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 ZSCAN9O15535 394 aaPredicted RBP12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 EFL1Q7Z2Z2 1120 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 GPR141Q7Z602 305 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 DEFB128Q7Z7B8 93 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 NUP93Q8N1F7 819 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 APBB2Q92870 758 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 TNFRSF25Q93038 417 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 PPP1R16BQ96T49 567 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 SP110Q9HB58 689 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 WHRNQ9P202 907 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 AMHP03971 560 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 POLBP06746 335 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 PTPN4P29074 926 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 TSPY1Q01534 308 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 GRIN1Q05586 938 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 LRRC26Q2I0M4 334 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 TRMT5Q32P41 509 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 SCUBE1Q8IWY4 988 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 TERB1Q8NA31 727 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 SPATA18Q8TC71 538 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 CNDP1Q96KN2 507 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 NPHP3-ACAD11A0A0J9YXS1 232 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 CST8O60676 142 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 HMOX2P30519 316 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 CCDC15Q0P6D6 951 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 KRR1Q13601 381 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 SNRNP35Q16560 246 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 WASHC2DQ5SRD0 308 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 ANKRD33Q7Z3H0 272 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 TNIP3Q96KP6 325 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 ZNF560Q96MR9 790 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 PPP1R2P1Q96PQ5 205 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 FRMD8P1Q9BZ68 369 aaPredicted RBP12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 NEUROG2Q9H2A3 272 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 TRMT13Q9NUP7 481 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 MSRAQ9UJ68 235 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 M0R2N6 131 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 PITPNM1O00562 1244 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 THRAP10827 490 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 ARPP19P56211 112 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 MRPS6P82932 125 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 SLC20A2Q08357 652 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 EMC2Q15006 297 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 RBBP7Q16576 425 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 NAIF1Q69YI7 327 aaPredicted RBP12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 SZRD1Q7Z422 152 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 TRIM69Q86WT6 500 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 EPS8L3Q8TE67 593 aaKnown RBP12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 SH3GL2Q99962 352 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 TFR2Q9UP52 801 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 LRCH1Q9Y2L9 728 aa12.23□□□□□ -0.45
SYNGAP1-201ENST00000293748 TRPC5OSA6NMA1 111 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 CCNE2O96020 404 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 ZCCHC18P0CG32 403 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 STIP1P31948 543 aaKnown RBP12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 RECQLP46063 649 aaPredicted RBP12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 PLOD1Q02809 727 aaPredicted RBP12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 DEPDC1Q5TB30 811 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 DNAJB3Q8WWF6 145 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 SHISA4Q96DD7 197 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 PPP1R36Q96LQ0 422 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 MCEEQ96PE7 176 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 FTHL17Q9BXU8 183 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 LACRTQ9GZZ8 138 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 GOLPH3Q9H4A6 298 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 PCDHA2Q9Y5H9 948 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 CLPTM1O96005 669 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 TIMP1P01033 207 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 PSMC3P17980 439 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 TPI1P60174 286 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 KCNMA1Q12791 1236 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 PTK2BQ14289 1009 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 SMAD1Q15797 465 aaKnown RBP12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 WDR72Q3MJ13 1102 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 HORMAD1Q86X24 394 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 CALML6Q8TD86 181 aa12.22□□□□□ -0.45
SYNGAP1-201ENST00000293748 PDCD6IPQ8WUM4 868 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms