RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 RBM22Q9NW64 420 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHANK1-201ENST00000293441 TRPV2Q9Y5S1 764 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 OR1E1P30953 314 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 SERPINB10P48595 397 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 LRRC6Q86X45 466 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 IL17RAQ96F46 866 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 MED8Q96G25 268 aa17.81■□□□□ 0.44
SHANK1-201ENST00000293441 SMAD5Q99717 465 aaKnown RBP17.81■□□□□ 0.44
SHANK1-201ENST00000293441 FAM86B1E9PN63 330 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 FAM86B2P0C5J1 330 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 LSP1P33241 339 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 PPM1LQ5SGD2 360 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 HNRNPRO43390 633 aaKnown RBP17.8■□□□□ 0.44
SHANK1-201ENST00000293441 CPSF4O95639 269 aaKnown RBP17.8■□□□□ 0.44
SHANK1-201ENST00000293441 VGLL4Q14135 290 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 SLC39A12Q504Y0 691 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 PLEKHM3Q6ZWE6 761 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 USP50Q70EL3 339 aaPredicted RBP17.8■□□□□ 0.44
SHANK1-201ENST00000293441 CACUL1Q86Y37 369 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 ZNF229Q9UJW7 825 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 DYRK3O43781 588 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 STAU1O95793 577 aaKnown RBP17.8■□□□□ 0.44
SHANK1-201ENST00000293441 GSNP06396 782 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 MSH3P20585 1137 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 TRPC1P48995 793 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 VMP1Q96GC9 406 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 CCDC3Q9BQI4 270 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 TBC1D13Q9NVG8 400 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 WDR47O94967 919 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 CCDC130P13994 396 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 HALP42357 657 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 CYP51A1Q16850 503 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 ZNF571Q7Z3V5 609 aaPredicted RBP17.8■□□□□ 0.44
SHANK1-201ENST00000293441 NSL1Q96IY1 281 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 RARRES1P49788 294 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 ADAM32Q8TC27 787 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 PPP1R13LQ8WUF5 828 aa17.8■□□□□ 0.44
SHANK1-201ENST00000293441 IFRD1O00458 451 aaPredicted RBP17.79■□□□□ 0.44
SHANK1-201ENST00000293441 ARHGEF9O43307 516 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 CCNJLQ8IV13 435 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 CCDC126Q96EE4 140 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 UNKQ9C0B0 810 aaKnown RBP17.79■□□□□ 0.44
SHANK1-201ENST00000293441 GNG14A0A1W2PPG7 69 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 PPATQ06203 517 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 SGCGQ13326 291 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 CSHL1Q14406 222 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 ILDR2Q71H61 639 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 C16orf59Q7L2K0 433 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 ZFPM1Q8IX07 1006 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 PROSCO94903 275 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 POU6F1Q14863 301 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 TRIP10Q15642 601 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 KRT78Q8N1N4 520 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 MAGED4Q96JG8 741 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 EXOSC4Q9NPD3 245 aaKnown RBP17.79■□□□□ 0.44
SHANK1-201ENST00000293441 RNF19AQ9NV58 838 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 FBXL21Q9UKT6 434 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 VANGL2Q9ULK5 521 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 YWHAQP27348 245 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 OAZ1P54368 228 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 CDH8P55286 799 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 DACT2Q5SW24 774 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 TRMT11Q7Z4G4 463 aaKnown RBP17.79■□□□□ 0.44
SHANK1-201ENST00000293441 RMND5AQ9H871 391 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 MGAT4DA6NG13 374 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 UBXN8O00124 270 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 SLITRK3O94933 977 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 KRT8P05787 483 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 TUBP50607 506 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 MARC1Q5VT66 337 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 OTOP1Q7RTM1 612 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 WHRNQ9P202 907 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 AGLP35573 1532 aa17.79■□□□□ 0.44
SHANK1-201ENST00000293441 TRIM60Q495X7 471 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 IYDQ6PHW0 289 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 B3GALNT2Q8NCR0 500 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 NDEL1Q9GZM8 345 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 GPAMQ9HCL2 828 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 RAMP2O60895 175 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 TFE3P19532 575 aaPredicted RBP17.78■□□□□ 0.44
SHANK1-201ENST00000293441 ANXA11P50995 505 aaKnown RBP17.78■□□□□ 0.44
SHANK1-201ENST00000293441 SPIRE2Q8WWL2 714 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 SERAC1Q96JX3 654 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 SCN3BQ9NY72 215 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 RASSF9O75901 435 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 GZMAP12544 262 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 IGFBP4P22692 258 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 TAF2Q6P1X5 1199 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 ARHGEF19Q8IW93 802 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 ABRAQ8N0Z2 381 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 EXD1Q8NHP7 514 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 CSGALNACT1Q8TDX6 532 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 USE1Q9NZ43 259 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 APPL1Q9UKG1 709 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 BLOC1S6Q9UL45 172 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 MYPNQ86TC9 1320 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 APOA1P02647 267 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 MAPTP10636 758 aaKnown RBP17.78■□□□□ 0.44
SHANK1-201ENST00000293441 COPAP53621 1224 aa17.78■□□□□ 0.44
SHANK1-201ENST00000293441 NFIL3Q16649 462 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms