RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 SDR42E2A6NKP2 422 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 ARHGEF9O43307 516 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 TBC1D4O60343 1298 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 CDH3P22223 829 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 JAM2P57087 298 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 NR1D2Q14995 579 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 C6orf52Q5T4I8 152 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 ZNF618Q5T7W0 954 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 KRT27Q7Z3Y8 459 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 CCDC60Q8IWA6 550 aaPredicted RBP15.54■□□□□ 0.08
CASC3-201ENST00000264645 WDR41Q9HAD4 459 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 EML4Q9HC35 981 aaKnown RBP15.54■□□□□ 0.08
CASC3-201ENST00000264645 GNEQ9Y223 722 aaKnown RBP15.54■□□□□ 0.08
CASC3-201ENST00000264645 LSM1O15116 133 aaKnown RBP15.54■□□□□ 0.08
CASC3-201ENST00000264645 AVILO75366 819 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 CCDC166P0CW27 439 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 TUBP50607 506 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 GALNTL6Q49A17 601 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 RALGPS1Q5JS13 557 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 GPR107Q5VW38 600 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 CES3Q6UWW8 571 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 OTOP1Q7RTM1 612 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 TMC2Q8TDI7 906 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 GLMNQ92990 594 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 SLITRK1Q96PX8 696 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 CYP4F12Q9HCS2 524 aa15.54■□□□□ 0.08
CASC3-201ENST00000264645 HEATR9A2RTY3 570 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 NSUN2Q08J23 767 aaKnown RBP eCLIP15.53■□□□□ 0.08
CASC3-201ENST00000264645 MAMLD1Q13495 774 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 CDC42EP5Q6NZY7 148 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 C3orf67Q6ZVT6 689 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 STRA8Q7Z7C7 330 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 SEMA4DQ92854 862 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 RTFDC1Q9BY42 306 aaPredicted RBP15.53■□□□□ 0.08
CASC3-201ENST00000264645 MRPL4Q9BYD3 311 aaKnown RBP15.53■□□□□ 0.08
CASC3-201ENST00000264645 POLR1BQ9H9Y6 1135 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 GPAMQ9HCL2 828 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 KCNMB3Q9NPA1 279 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 EURLQ9NYK6 297 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 TGM2P21980 687 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 ADORA2BP29275 332 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 S100A5P33763 92 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 GCNT1Q02742 428 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 FUT11Q495W5 492 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 TNIP2Q8NFZ5 429 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 LRRC15Q8TF66 581 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 FRMD8P1Q9BZ68 369 aaPredicted RBP15.53■□□□□ 0.08
CASC3-201ENST00000264645 C6orf203Q9P0P8 240 aaPredicted RBP15.53■□□□□ 0.08
CASC3-201ENST00000264645 ITGB1BP2Q9UKP3 347 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 PSMD13Q9UNM6 376 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 TRIM13O60858 407 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 ZC3H11AO75152 810 aaKnown RBP eCLIP15.53■□□□□ 0.083e-6■■■□□ 17.8
CASC3-201ENST00000264645 RPS6KA4O75676 772 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 LCP1P13796 627 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 ACTR3P61158 418 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 PEX6Q13608 980 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 BOLA3Q53S33 107 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 ZFYVE19Q96K21 471 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 MARK4Q96L34 752 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 CCDC167Q9P0B6 97 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 MYH6P13533 1939 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 FAM155BO75949 473 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 ABCG1P45844 678 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 TRIM60Q495X7 471 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 APOL2Q9BQE5 337 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 CNGB3Q9NQW8 809 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 TRNAU1APQ9NX07 287 aaKnown RBP15.53■□□□□ 0.08
CASC3-201ENST00000264645 LNPEPQ9UIQ6 1025 aa15.53■□□□□ 0.08
CASC3-201ENST00000264645 LINC00854A0A1B0GVQ3 168 aa15.52■□□□□ 0.08
CASC3-201ENST00000264645 TRPC5OSA6NMA1 111 aa15.52■□□□□ 0.08
CASC3-201ENST00000264645 SPATA31C1P0DKV0 1188 aa15.52■□□□□ 0.08
CASC3-201ENST00000264645 NFKBIAP25963 317 aa15.52■□□□□ 0.08
CASC3-201ENST00000264645 XIAPP98170 497 aa15.52■□□□□ 0.08
CASC3-201ENST00000264645 TAF5Q15542 800 aa15.52■□□□□ 0.08
CASC3-201ENST00000264645 RNF149Q8NC42 400 aa15.52■□□□□ 0.08
CASC3-201ENST00000264645 PSPC1Q8WXF1 523 aaKnown RBP15.52■□□□□ 0.08
CASC3-201ENST00000264645 CEP41Q9BYV8 373 aa15.52■□□□□ 0.08
CASC3-201ENST00000264645 DRG1Q9Y295 367 aaKnown RBP15.52■□□□□ 0.08
CASC3-201ENST00000264645 RARBP10826 455 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 GFAPP14136 432 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 RARRES1P49788 294 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 CAPRIN1Q14444 709 aaKnown RBP15.52■□□□□ 0.07
CASC3-201ENST00000264645 EML3Q32P44 896 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 TRAF7Q6Q0C0 670 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 ELMO2Q96JJ3 720 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 SIX2Q9NPC8 291 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 PNPOQ9NVS9 261 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 PHGDHO43175 533 aaKnown RBP15.52■□□□□ 0.07
CASC3-201ENST00000264645 MFN2O95140 757 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 PTGER2P43116 358 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 AP3M2P53677 418 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 PLIN5Q00G26 463 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 NFIAQ12857 509 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 DENND1BQ6P3S1 775 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 KYAT3Q6YP21 454 aaKnown RBP15.52■□□□□ 0.07
CASC3-201ENST00000264645 ENDOVQ8N8Q3 282 aaKnown RBP15.52■□□□□ 0.07
CASC3-201ENST00000264645 CDC26Q8NHZ8 85 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 USP33Q8TEY7 942 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 KREMEN1Q96MU8 473 aa15.52■□□□□ 0.07
CASC3-201ENST00000264645 ADAM7Q9H2U9 754 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms