RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 SYT17Q9BSW7 474 aa16.32■□□□□ 0.2
SHANK3-201ENST00000262795 TUBB6Q9BUF5 446 aa16.32■□□□□ 0.2
SHANK3-201ENST00000262795 FBXO44Q9H4M3 255 aa16.32■□□□□ 0.2
SHANK3-201ENST00000262795 KRCC1Q9NPI7 259 aaPredicted RBP16.32■□□□□ 0.2
SHANK3-201ENST00000262795 ANKEF1Q9NU02 776 aa16.32■□□□□ 0.2
SHANK3-201ENST00000262795 SIRPGQ9P1W8 387 aa16.32■□□□□ 0.2
SHANK3-201ENST00000262795 MYL6P60660 151 aa16.32■□□□□ 0.2
SHANK3-201ENST00000262795 PANX2Q96RD6 677 aa16.32■□□□□ 0.2
SHANK3-201ENST00000262795 NMRK1Q9NWW6 199 aa16.32■□□□□ 0.2
SHANK3-201ENST00000262795 SHOC2Q9UQ13 582 aa16.32■□□□□ 0.2
SHANK3-201ENST00000262795 AIM2O14862 343 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 NOS3P29474 1203 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 TIGD7Q6NT04 549 aaPredicted RBP16.31■□□□□ 0.2
SHANK3-201ENST00000262795 RNASE11Q8TAA1 199 aaKnown RBP16.31■□□□□ 0.2
SHANK3-201ENST00000262795 RIT2Q99578 217 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 EXOSC4Q9NPD3 245 aaKnown RBP16.31■□□□□ 0.2
SHANK3-201ENST00000262795 NDE1Q9NXR1 346 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 C4orf33Q8N1A6 199 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 BBS4Q96RK4 519 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 OSBPL9Q96SU4 736 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 PRMT1Q99873 361 aaKnown RBP16.31■□□□□ 0.2
SHANK3-201ENST00000262795 EPB41L4AQ9HCS5 686 aaPredicted RBP16.31■□□□□ 0.2
SHANK3-201ENST00000262795 CYP2A6P11509 494 aaPredicted RBP16.31■□□□□ 0.2
SHANK3-201ENST00000262795 GPR1P46091 355 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 LONRF1Q17RB8 773 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 CBWD2Q8IUF1 395 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 SUPT7LO94864 414 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 LTFP02788 710 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 TPH1P17752 444 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 KCNK10P57789 538 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 GLT6D1Q7Z4J2 308 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 FEZF2Q8TBJ5 459 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 RFFLQ8WZ73 363 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 DEPDC7Q96QD5 511 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 TRIM51Q9BSJ1 452 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 TM6SF2Q9BZW4 377 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 SGPL1O95470 568 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 NPTX2P47972 431 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 CAV1Q03135 178 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 PPIL2Q13356 520 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 RASGRP2Q7LDG7 609 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 ILDR1Q86SU0 546 aaPredicted RBP16.31■□□□□ 0.2
SHANK3-201ENST00000262795 PCDHAC2Q9Y5I4 1007 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 ARHGEF5Q12774 1597 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 SEPT4O43236 478 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 LRRC36Q1X8D7 754 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 ZSWIM2Q8NEG5 633 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 TUBGCP3Q96CW5 907 aa16.31■□□□□ 0.2
SHANK3-201ENST00000262795 PRR23D1E9PI22 279 aaPredicted RBP16.3■□□□□ 0.2
SHANK3-201ENST00000262795 CRTAMO95727 393 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 JCHAINP01591 159 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 PRR23D2P0DMB1 279 aaPredicted RBP16.3■□□□□ 0.2
SHANK3-201ENST00000262795 SLC1A1P43005 524 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 CENPCQ03188 943 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 NFE2Q16621 373 aaPredicted RBP16.3■□□□□ 0.2
SHANK3-201ENST00000262795 C3orf62Q6ZUJ4 267 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 R3HCC1LQ7Z5L2 792 aaKnown RBP16.3■□□□□ 0.2
SHANK3-201ENST00000262795 C2orf73Q8N5S3 287 aaPredicted RBP16.3■□□□□ 0.2
SHANK3-201ENST00000262795 NPHS2Q9NP85 383 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 TULP4Q9NRJ4 1543 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 RASGRP1O95267 797 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 SBK1Q52WX2 424 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 MRNIPQ6NTE8 343 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 SCAIQ8N9R8 606 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 FBXO22Q8NEZ5 403 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 REXO5Q96IC2 774 aaKnown RBP16.3■□□□□ 0.2
SHANK3-201ENST00000262795 FANCEQ9HB96 536 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 VTA1Q9NP79 307 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 ZMYM5Q9UJ78 669 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 CCR1P32246 355 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 DHPSP49366 369 aaPredicted RBP16.3■□□□□ 0.2
SHANK3-201ENST00000262795 CCNG1P51959 295 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 POU6F1Q14863 301 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 TRIM8Q9BZR9 551 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 TMEM60Q9H2L4 133 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 BPIFA1Q9NP55 256 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 EMC1Q8N766 993 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 PREX2Q70Z35 1606 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 SLC16A3O15427 465 aaKnown RBP16.3■□□□□ 0.2
SHANK3-201ENST00000262795 RAMP2O60895 175 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 GLUD1P00367 558 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 GARTP22102 1010 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 TUFMP49411 452 aaKnown RBP16.3■□□□□ 0.2
SHANK3-201ENST00000262795 MRPS6P82932 125 aaKnown RBP16.3■□□□□ 0.2
SHANK3-201ENST00000262795 ZNF200P98182 395 aaPredicted RBP16.3■□□□□ 0.2
SHANK3-201ENST00000262795 ALX1Q15699 326 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 C3orf67Q6ZVT6 689 aa16.3■□□□□ 0.2
SHANK3-201ENST00000262795 CLUP10909 449 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 CYTH1Q15438 398 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 PCNX4Q63HM2 1172 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 BTNL9Q6UXG8 535 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 ECSITQ9BQ95 431 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 REXO4Q9GZR2 422 aaKnown RBP16.29■□□□□ 0.2
SHANK3-201ENST00000262795 NEU2Q9Y3R4 380 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 PRKAG1P54619 331 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 PTK7Q13308 1070 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 PDIA5Q14554 519 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 EIF3LQ9Y262 564 aaKnown RBP16.29■□□□□ 0.2
SHANK3-201ENST00000262795 LAMC1P11047 1609 aa16.29■□□□□ 0.2
SHANK3-201ENST00000262795 NCAM2O15394 837 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms