RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 RBM22Q9NW64 420 aaKnown RBP eCLIP12.53□□□□□ -0.48e-7■■■■■ 35
SPG11-201ENST00000261866 THG1LQ9NWX6 298 aaKnown RBP12.53□□□□□ -0.4
SPG11-201ENST00000261866 ATP5HO75947 161 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 AGTP01019 485 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 CAPN1P07384 714 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 SNRPFP62306 86 aaKnown RBP12.53□□□□□ -0.4
SPG11-201ENST00000261866 TFDP3Q5H9I0 405 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 CCDC81Q6ZN84 652 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 USP50Q70EL3 339 aaPredicted RBP12.53□□□□□ -0.4
SPG11-201ENST00000261866 SV2AQ7L0J3 742 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 USP6NLQ92738 828 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 PNMA5Q96PV4 448 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 EHD4Q9H223 541 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 RHBGQ9H310 441 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 RNPEPQ9H4A4 650 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 PADI4Q9UM07 663 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 TRPV2Q9Y5S1 764 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 VCLP18206 1134 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 MSH3P20585 1137 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 IKBKEQ14164 716 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 TOMM20Q15388 145 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 RARS2Q5T160 578 aaKnown RBP12.53□□□□□ -0.4
SPG11-201ENST00000261866 TREML2Q5T2D2 321 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 ILDR2Q71H61 639 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 C4orf19Q8IY42 314 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 PHF21BQ96EK2 531 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 SPATS2LQ9NUQ6 558 aaKnown RBP12.53□□□□□ -0.4
SPG11-201ENST00000261866 CDY2AQ9Y6F7 541 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 SEC23AQ15436 765 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 MRNIPQ6NTE8 343 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 UGT3A1Q6NUS8 523 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 SLC27A1Q6PCB7 646 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 ANO5Q75V66 913 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 UNC45BQ8IWX7 931 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 NETO2Q8NC67 525 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 ZNF473Q8WTR7 871 aaKnown RBP12.53□□□□□ -0.4
SPG11-201ENST00000261866 FAM198AQ9UFP1 575 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 PTPAQ15257 358 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 CNGA3Q16281 694 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 SPOCD1Q6ZMY3 1216 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 FAM124AQ86V42 546 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 ERP44Q9BS26 406 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 ABHD16BQ9H3Z7 469 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 SHOC2Q9UQ13 582 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 DYRK1BQ9Y463 629 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 STRNO43815 780 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 NUDT2P50583 147 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 CENPCQ03188 943 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 DENND1BQ6P3S1 775 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 ZNF571Q7Z3V5 609 aaPredicted RBP12.53□□□□□ -0.4
SPG11-201ENST00000261866 SOCS4Q8WXH5 440 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 DEFB118Q96PH6 123 aa12.53□□□□□ -0.4
SPG11-201ENST00000261866 AAR2Q9Y312 384 aaKnown RBP12.53□□□□□ -0.4
SPG11-201ENST00000261866 NKRFO15226 690 aaKnown RBP eCLIP12.52□□□□□ -0.4
SPG11-201ENST00000261866 TSC22D3Q99576 134 aa12.52□□□□□ -0.4
SPG11-201ENST00000261866 ECSITQ9BQ95 431 aa12.52□□□□□ -0.4
SPG11-201ENST00000261866 UBXN6Q9BZV1 441 aa12.52□□□□□ -0.4
SPG11-201ENST00000261866 RANBP17Q9H2T7 1088 aaKnown RBP12.52□□□□□ -0.4
SPG11-201ENST00000261866 GRID1Q9ULK0 1009 aa12.52□□□□□ -0.4
SPG11-201ENST00000261866 A0A1W2PQJ5 194 aa12.52□□□□□ -0.4
SPG11-201ENST00000261866 TBC1D3BA6NDS4 549 aa12.52□□□□□ -0.4
SPG11-201ENST00000261866 YWHAQP27348 245 aa12.52□□□□□ -0.4
SPG11-201ENST00000261866 MTFR1Q15390 333 aa12.52□□□□□ -0.4
SPG11-201ENST00000261866 FGD2Q7Z6J4 655 aa12.52□□□□□ -0.4
SPG11-201ENST00000261866 DIS3LQ8TF46 1054 aaKnown RBP12.52□□□□□ -0.4
SPG11-201ENST00000261866 DISP2A7MBM2 1401 aa12.52□□□□□ -0.4
SPG11-201ENST00000261866 BUD23O43709 281 aaKnown RBP12.52□□□□□ -0.41
SPG11-201ENST00000261866 SEC24CP53992 1094 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 RPS7P62081 194 aaKnown RBP12.52□□□□□ -0.41
SPG11-201ENST00000261866 TTLL9Q3SXZ7 439 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 ANKS6Q68DC2 871 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 TIGD7Q6NT04 549 aaPredicted RBP12.52□□□□□ -0.41
SPG11-201ENST00000261866 PARP9Q8IXQ6 854 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 EXOSC4Q9NPD3 245 aaKnown RBP12.52□□□□□ -0.41
SPG11-201ENST00000261866 SPG21Q9NZD8 308 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 SMIM10L2AP0DMW4 78 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 SMIM10L2BP0DMW5 78 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 GARTP22102 1010 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 FDFT1P37268 417 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 NSMCE4AQ9NXX6 385 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 ITGA11Q9UKX5 1188 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 NRXN1Q9ULB1 1477 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 B2RBV5 119 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 MYO1CO00159 1063 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 CXCL11O14625 94 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 CDH16O75309 829 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 RECQL4O94761 1208 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 GLP2RO95838 553 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 SP3Q02447 781 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 ARID3BQ8IVW6 561 aaPredicted RBP12.52□□□□□ -0.41
SPG11-201ENST00000261866 CD302Q8IX05 232 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 EME1Q96AY2 570 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 ZMYM5Q9UJ78 669 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 SMG5Q9UPR3 1016 aaKnown RBP12.52□□□□□ -0.41
SPG11-201ENST00000261866 WDR27A2RRH5 827 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 PSTPIP1O43586 416 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 KDM1AO60341 852 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 TSC22D2O75157 780 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 HPGDP15428 266 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 ITGALP20701 1170 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms