RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 PHF24Q9UPV7 400 aa9.52□□□□□ -0.89
PDE6A-201ENST00000255266 PITPNM1O00562 1244 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 HSPA4LO95757 839 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 TIMP1P01033 207 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 CYBAP13498 195 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 NR2C2P49116 596 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 CLK2P49760 499 aaKnown RBP9.51□□□□□ -0.89
PDE6A-201ENST00000255266 IRX4P78413 519 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 PDIA2Q13087 525 aaKnown RBP9.51□□□□□ -0.89
PDE6A-201ENST00000255266 LLGL1Q15334 1064 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 INTS6LQ5JSJ4 861 aaKnown RBP9.51□□□□□ -0.89
PDE6A-201ENST00000255266 SYCP2LQ5T4T6 812 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 CDC26Q8NHZ8 85 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 GDAP1L1Q96MZ0 367 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 NECTIN4Q96NY8 510 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 BBS2Q9BXC9 721 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 LMAN2LQ9H0V9 348 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 NMRK1Q9NWW6 199 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 COL20A1Q9P218 1284 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 TRHDEQ9UKU6 1024 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 HES2Q9Y543 173 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 F8VZ95 297 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 ZWINTO95229 277 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 MSH3P20585 1137 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 KELP23276 732 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 CBX1P83916 185 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 UBE3AQ05086 875 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 GAD2Q05329 585 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 ZNF438Q7Z4V0 828 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 EDEM1Q92611 657 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 OSBPL9Q96SU4 736 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 CDCA3Q99618 268 aaPredicted RBP9.51□□□□□ -0.89
PDE6A-201ENST00000255266 TRAIPQ9BWF2 469 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 CNGB3Q9NQW8 809 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 SNED1Q8TER0 1413 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 A0A0A6YYK5 440 aaPredicted RBP9.51□□□□□ -0.89
PDE6A-201ENST00000255266 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.51□□□□□ -0.89
PDE6A-201ENST00000255266 A0A1W2PQ67 120 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 GSTA4O15217 222 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 DAB1O75553 588 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 GRK3P35626 688 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 FAM35AQ86V20 835 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 ZNF606Q8WXB4 792 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 VAT1Q99536 393 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 FAM167BQ9BTA0 163 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 DUSP16Q9BY84 665 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 NT5C1B-RDH14C9J2C7 533 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 CST8O60676 142 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 TBL1XO60907 577 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 ERVK-10P10266 1014 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 HTR1BP28222 390 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 SKP1P63208 163 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 ACOX1Q15067 660 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 BRMS1LQ5PSV4 323 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 KCNT2Q6UVM3 1135 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 SPATA24Q86W54 205 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 DCLK2Q8N568 766 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 PHOSPHO2Q8TCD6 241 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 WFIKKN2Q8TEU8 576 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 WNT8BQ93098 351 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 TIFAQ96CG3 184 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 DEC1Q9P2X7 70 aa9.51□□□□□ -0.89
PDE6A-201ENST00000255266 CTIFO43310 598 aaKnown RBP9.5□□□□□ -0.89
PDE6A-201ENST00000255266 TTC4O95801 387 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 SPATA31C1P0DKV0 1188 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 PLCL1Q15111 1095 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 EFL1Q7Z2Z2 1120 aaKnown RBP9.5□□□□□ -0.89
PDE6A-201ENST00000255266 DEFB106AQ8N104 65 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 BADQ92934 168 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 PLD4Q96BZ4 506 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 MFSD14AQ96MC6 490 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 AGAP3Q96P47 875 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 LATS2Q9NRM7 1088 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 DUS2Q9NX74 493 aaKnown RBP9.5□□□□□ -0.89
PDE6A-201ENST00000255266 CCDC88AQ3V6T2 1871 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 B4GALT5O43286 388 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 SNAI1O95863 264 aaPredicted RBP9.5□□□□□ -0.89
PDE6A-201ENST00000255266 USP4Q13107 963 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 ZNF211Q13398 564 aaPredicted RBP9.5□□□□□ -0.89
PDE6A-201ENST00000255266 PTPN21Q16825 1174 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 EARS2Q5JPH6 523 aaKnown RBP9.5□□□□□ -0.89
PDE6A-201ENST00000255266 TMTC4Q5T4D3 741 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 TPGS1Q6ZTW0 290 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 KDELC2Q7Z4H8 507 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 PHACTR4Q8IZ21 702 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 VPS11Q9H270 941 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 SMYD3Q9H7B4 428 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 RAB6BQ9NRW1 208 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 ZNF862O60290 1169 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 ITIH2P19823 946 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 HTR7P34969 479 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 ZNF200P98182 395 aaPredicted RBP9.5□□□□□ -0.89
PDE6A-201ENST00000255266 FAM187BQ17R55 369 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 ARMC12Q5T9G4 340 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 ALS2CLQ60I27 953 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 PPFIBP2Q8ND30 876 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 PPP1R13LQ8WUF5 828 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 ELMO2Q96JJ3 720 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 TUBB6Q9BUF5 446 aa9.5□□□□□ -0.89
PDE6A-201ENST00000255266 LRRC40Q9H9A6 602 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms