RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 Q6ZS52 159 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 MIB1Q86YT6 1006 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 FAM71AQ8IYT1 594 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 ADGRG2Q8IZP9 1017 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 RNF139Q8WU17 664 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 ZNF606Q8WXB4 792 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 GOLGA1Q92805 767 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 PLD4Q96BZ4 506 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 LSM14BQ9BX40 385 aaKnown RBP13.38□□□□□ -0.27
VPREB3-201ENST00000248948 NAA15Q9BXJ9 866 aaKnown RBP13.38□□□□□ -0.27
VPREB3-201ENST00000248948 FAM126AQ9BYI3 521 aaPredicted RBP13.38□□□□□ -0.27
VPREB3-201ENST00000248948 DCLK3Q9C098 648 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 RBM12Q9NTZ6 932 aaKnown RBP13.38□□□□□ -0.27
VPREB3-201ENST00000248948 MARK1Q9P0L2 795 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 MARCH2Q9P0N8 246 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 ZNF510Q9Y2H8 683 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 FHOD1Q9Y613 1164 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 DMDP11532 3685 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 EML5Q05BV3 1969 aa13.38□□□□□ -0.27
VPREB3-201ENST00000248948 ATG2BQ96BY7 2078 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 CHURC1-FNTBB4DL54 471 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 F8VZ95 297 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 SCAMP3O14828 347 aaKnown RBP13.37□□□□□ -0.27
VPREB3-201ENST00000248948 MDM4O15151 490 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 CALCAP01258 141 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 OPRD1P41143 372 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 RGS7P49802 495 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 COPB1P53618 953 aaKnown RBP13.37□□□□□ -0.27
VPREB3-201ENST00000248948 BPIFB4P59827 614 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 GAD2Q05329 585 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 EFEMP1Q12805 493 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 PDCLQ13371 301 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 RAPGEF1Q13905 1077 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 GAS6Q14393 721 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 PREPLQ4J6C6 727 aaPredicted RBP13.37□□□□□ -0.27
VPREB3-201ENST00000248948 BSPRYQ5W0U4 402 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 DENND1BQ6P3S1 775 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 RHBDF2Q6PJF5 856 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 BEND5Q7L4P6 421 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 AOPEPQ8N6M6 819 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 NELL1Q92832 810 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 FUCA2Q9BTY2 467 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 SLC4A5Q9BY07 1137 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 VPS16Q9H269 839 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 GANQ9H2C0 597 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 HSD3B7Q9H2F3 369 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 SPHK2Q9NRA0 654 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 FAM86C1Q9NVL1 165 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 NUDT5Q9UKK9 219 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 HBS1LQ9Y450 684 aaKnown RBP13.37□□□□□ -0.27
VPREB3-201ENST00000248948 CEP83Q9Y592 693 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 PCDHGA2Q9Y5H1 932 aa13.37□□□□□ -0.27
VPREB3-201ENST00000248948 ATG13O75143 517 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 GABBR2O75899 941 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 LATS1O95835 1130 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 EGFP01133 1207 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 LTFP02788 710 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 TDGF1P13385 188 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 GALK1P51570 392 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 NNTQ13423 1086 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 DRAP1Q14919 205 aaPredicted RBP13.36□□□□□ -0.27
VPREB3-201ENST00000248948 LY6G5CQ5SRR4 150 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 NAIF1Q69YI7 327 aaPredicted RBP13.36□□□□□ -0.27
VPREB3-201ENST00000248948 TMEM110Q86TL2 294 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 ETFBKMTQ8IXQ9 262 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 FAM217AQ8IXS0 508 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 WBP2Q969T9 261 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 ACDQ96AP0 544 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 NOX5Q96PH1 765 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 STK33Q9BYT3 514 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 LHX5Q9H2C1 402 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 SEMA4AQ9H3S1 761 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 ACP6Q9NPH0 428 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 ST7Q9NRC1 585 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 PLXND1Q9Y4D7 1925 aa13.36□□□□□ -0.27
VPREB3-201ENST00000248948 USP34Q70CQ2 3546 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 LRRC10BA6NIK2 292 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 SMTNL1A8MU46 457 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 E5RJQ4 531 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 FOXN3O00409 490 aaPredicted RBP13.35□□□□□ -0.27
VPREB3-201ENST00000248948 CACNG3O60359 315 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 RNF40O75150 1001 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 PNMA6AP0CW24 399 aaPredicted RBP13.35□□□□□ -0.27
VPREB3-201ENST00000248948 CYP11B1P15538 503 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 CORO1AP31146 461 aaKnown RBP13.35□□□□□ -0.27
VPREB3-201ENST00000248948 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
VPREB3-201ENST00000248948 CLCN1P35523 988 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 CHKAP35790 457 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 CXCL12P48061 93 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 NRLP54845 237 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 ZNF445P59923 1031 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 SATB1Q01826 763 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 CSTF1Q05048 431 aaKnown RBP13.35□□□□□ -0.27
VPREB3-201ENST00000248948 TRIP4Q15650 581 aaPredicted RBP13.35□□□□□ -0.27
VPREB3-201ENST00000248948 APTXQ7Z2E3 356 aaKnown RBP13.35□□□□□ -0.27
VPREB3-201ENST00000248948 SLC47A2Q86VL8 602 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 C12orf40Q86WS4 652 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 CPXM2Q8N436 756 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 IPO4Q8TEX9 1081 aaKnown RBP13.35□□□□□ -0.27
VPREB3-201ENST00000248948 CLEC4CQ8WTT0 213 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms