RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 PAPLNO95428 1278 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 PFKMP08237 780 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 KRT16P08779 473 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 PF4V1P10720 104 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 FOSL1P15407 271 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 NQO1P15559 274 aaKnown RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 DDX5P17844 614 aaKnown RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 RHCEP18577 417 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 NR1D1P20393 614 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 GRNP28799 593 aaKnown RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 CCR3P51677 355 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 NCKAP1LP55160 1127 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 TUBB4BP68371 445 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 FAM189BP81408 668 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 AMPD2Q01433 879 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 RHDQ02161 417 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 KCNC4Q03721 635 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 TBL3Q12788 808 aaKnown RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 E2F2Q14209 437 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 LPIN1Q14693 890 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 RASA2Q15283 850 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 TEAD4Q15561 434 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 SNAP47Q5SQN1 464 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 NT5DC1Q5TFE4 455 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 MIER3Q7Z3K6 550 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 MAP7D3Q8IWC1 876 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.81□□□□□ -1.8
UFM1-201ENST00000239878 ZC3H3Q8IXZ2 948 aaKnown RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 FAM186BQ8IYM0 893 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 LRRC43Q8N309 656 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 NAXEQ8NCW5 288 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 SLC17A8Q8NDX2 589 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 KCNG4Q8TDN1 519 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 TMEM40Q8WWA1 233 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 BSNDQ8WZ55 320 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 GLT1D1Q96MS3 346 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 MENTQ9BUN1 341 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 EIF2AQ9BY44 585 aaKnown RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 MRPL4Q9BYD3 311 aaKnown RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 KIAA1586Q9HCI6 787 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 MAN1C1Q9NR34 630 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 INTS13Q9NVM9 706 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 EURLQ9NYK6 297 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 ITGB1BP2Q9UKP3 347 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 PCDHA7Q9UN72 937 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 PCDHA12Q9UN75 941 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 TRIM33Q9UPN9 1127 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 TMEM150BA6NC51 233 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 ZNF233A6NK53 670 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 CCT8L1PA6NM43 557 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 TTC34A8MYJ7 566 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 CDK2AP1O14519 115 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 EREGO14944 169 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 TTI1O43156 1089 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 KLRC4O43908 158 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 SRGAP2O75044 1071 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 MAPTP10636 758 aaKnown RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 CMA1P23946 247 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 TKTP29401 623 aaKnown RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 RAD52P43351 418 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 GPC3P51654 580 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 CACNA2D1P54289 1103 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 ADARP55265 1226 aaKnown RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 MRPS25P82663 173 aaKnown RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 FBXO47Q5MNV8 452 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 TMTC4Q5T4D3 741 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 IQCEQ6IPM2 695 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 TMTC1Q8IUR5 882 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 VSTM4Q8IW00 320 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 CMTR2Q8IYT2 770 aaKnown RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 CACNA2D3Q8IZS8 1091 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 KIF2BQ8N4N8 673 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 TC2NQ8N9U0 490 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 ZSCAN18Q8TBC5 510 aaPredicted RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 ASAP3Q8TDY4 903 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 RAD54LQ92698 747 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 CASP10Q92851 521 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 FUBP3Q96I24 572 aaKnown RBP eCLIP3.81□□□□□ -1.8
UFM1-201ENST00000239878 CRB3Q9BUF7 120 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 PLVAPQ9BX97 442 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 WDR12Q9GZL7 423 aaKnown RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 MIS12Q9H081 205 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 MAGEF1Q9HAY2 307 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 CLK4Q9HAZ1 481 aaKnown RBP3.81□□□□□ -1.8
UFM1-201ENST00000239878 SETD4Q9NVD3 440 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 ARHGAP28Q9P2N2 729 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 MOSPD1Q9UJG1 213 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 CFAP45Q9UL16 551 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 STYXL1Q9Y6J8 313 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 SLC4A7Q9Y6M7 1214 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 KANSL1LA0AUZ9 987 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 C5orf60A6NFR6 353 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 CETN3O15182 167 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 NCAM2O15394 837 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 MAGEB2O15479 319 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 TRAPPC3O43617 180 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 LCA5LO95447 670 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 SELPP16109 830 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 CES1P23141 567 aa3.81□□□□□ -1.8
UFM1-201ENST00000239878 TMOD1P28289 359 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms