RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 GAB3Q8WWW8 586 aa14.93□□□□□ -0.02
GPN3-201ENST00000228827 RMDN1Q96DB5 314 aa14.93□□□□□ -0.02
GPN3-201ENST00000228827 ZSWIM1Q9BR11 485 aa14.93□□□□□ -0.02
GPN3-201ENST00000228827 CLSTN2Q9H4D0 955 aa14.93□□□□□ -0.02
GPN3-201ENST00000228827 DEC1Q9P2X7 70 aa14.93□□□□□ -0.02
GPN3-201ENST00000228827 KIAA1257Q9ULG3 409 aa14.93□□□□□ -0.02
GPN3-201ENST00000228827 MMP17Q9ULZ9 603 aa14.93□□□□□ -0.02
GPN3-201ENST00000228827 FANCMQ8IYD8 2048 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 CCDC163A0A0D9SF12 145 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 SLC12A8A0AV02 714 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 M0QYV0 167 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 DCLK1O15075 740 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 RETP07949 1114 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 SETSIPP0DME0 302 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 TYRP14679 529 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 MRPS21P82921 87 aaKnown RBP14.92□□□□□ -0.02
GPN3-201ENST00000228827 C10orf76Q5T2E6 689 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 PM20D1Q6GTS8 502 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 LCLAT1Q6UWP7 414 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 Q6ZNB5 142 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 KBTBD6Q86V97 674 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 IL17RCQ8NAC3 791 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 CNOT6LQ96LI5 555 aaKnown RBP14.92□□□□□ -0.02
GPN3-201ENST00000228827 KREMEN1Q96MU8 473 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 IPO9Q96P70 1041 aaKnown RBP14.92□□□□□ -0.02
GPN3-201ENST00000228827 MED15Q96RN5 788 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 CRACR2AQ9BSW2 395 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 TPSD1Q9BZJ3 242 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 DNAJC17Q9NVM6 304 aaKnown RBP14.92□□□□□ -0.02
GPN3-201ENST00000228827 MARCH2Q9P0N8 246 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 INVSQ9Y283 1065 aa14.92□□□□□ -0.02
GPN3-201ENST00000228827 SGK1O00141 431 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 KLKB1P03952 638 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 KRT5P13647 590 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 HNRNPLP14866 589 aaKnown RBP eCLIP14.91□□□□□ -0.02
GPN3-201ENST00000228827 TGM1P22735 817 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 CORO1AP31146 461 aaKnown RBP14.91□□□□□ -0.02
GPN3-201ENST00000228827 TNFRSF4P43489 277 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 KIR2DL1P43626 348 aaPredicted RBP14.91□□□□□ -0.02
GPN3-201ENST00000228827 COG7P83436 770 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 GCNT1Q02742 428 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 GRAMD4Q6IC98 578 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 ANO7Q6IWH7 933 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 TMEM92Q6UXU6 159 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 BHLHA9Q7RTU4 235 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 CACNA2D4Q7Z3S7 1137 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 ZNF276Q8N554 614 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 GPR161Q8N6U8 529 aaKnown RBP14.91□□□□□ -0.02
GPN3-201ENST00000228827 EDEM1Q92611 657 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 XPO6Q96QU8 1125 aaKnown RBP14.91□□□□□ -0.02
GPN3-201ENST00000228827 UBE2TQ9NPD8 197 aaPredicted RBP14.91□□□□□ -0.02
GPN3-201ENST00000228827 PLK2Q9NYY3 685 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 STRIP2Q9ULQ0 834 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.91□□□□□ -0.02
GPN3-201ENST00000228827 WDR87Q6ZQQ6 2873 aa14.91□□□□□ -0.02
GPN3-201ENST00000228827 A0A0A0MRY4 1105 aa14.9□□□□□ -0.02
GPN3-201ENST00000228827 CCDC6Q16204 474 aa14.9□□□□□ -0.02
GPN3-201ENST00000228827 CNGA2Q16280 664 aa14.9□□□□□ -0.02
GPN3-201ENST00000228827 CRY1Q16526 586 aa14.9□□□□□ -0.02
GPN3-201ENST00000228827 TPD52L1Q16890 204 aaPredicted RBP14.9□□□□□ -0.02
GPN3-201ENST00000228827 RSPO4Q2I0M5 234 aaPredicted RBP14.9□□□□□ -0.02
GPN3-201ENST00000228827 PREPLQ4J6C6 727 aaPredicted RBP14.9□□□□□ -0.02
GPN3-201ENST00000228827 PKDCCQ504Y2 493 aa14.9□□□□□ -0.02
GPN3-201ENST00000228827 PMF1Q6P1K2 205 aa14.9□□□□□ -0.02
GPN3-201ENST00000228827 GJB7Q6PEY0 223 aa14.9□□□□□ -0.02
GPN3-201ENST00000228827 TOGARAM2Q6ZUX3 1019 aa14.9□□□□□ -0.02
GPN3-201ENST00000228827 DENND1CQ8IV53 801 aa14.9□□□□□ -0.02
GPN3-201ENST00000228827 TERB1Q8NA31 727 aa14.9□□□□□ -0.02
GPN3-201ENST00000228827 KCTD13Q8WZ19 329 aa14.9□□□□□ -0.02
GPN3-201ENST00000228827 MARK1Q9P0L2 795 aa14.9□□□□□ -0.02
GPN3-201ENST00000228827 WDR35Q9P2L0 1181 aa14.9□□□□□ -0.02
GPN3-201ENST00000228827 AGO1Q9UL18 857 aaKnown RBP14.9□□□□□ -0.02
GPN3-201ENST00000228827 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.9□□□□□ -0.02
GPN3-201ENST00000228827 MYO16Q9Y6X6 1858 aa14.9□□□□□ -0.02
GPN3-201ENST00000228827 YJEFN3A6XGL0 299 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 E7ENQ6 273 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 CACNG3O60359 315 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 GABBR2O75899 941 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 CHRM1P11229 460 aaPredicted RBP14.89□□□□□ -0.03
GPN3-201ENST00000228827 KCNA4P22459 653 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 WASP42768 502 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 ZNF132P52740 706 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 APBA1Q02410 837 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 STILQ15468 1287 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 EOGTQ5NDL2 527 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 BSPRYQ5W0U4 402 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 NUDT18Q6ZVK8 323 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 FMNL3Q8IVF7 1028 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 ZNF513Q8N8E2 541 aaPredicted RBP14.89□□□□□ -0.03
GPN3-201ENST00000228827 MLKLQ8NB16 471 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 MDGA1Q8NFP4 955 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 RNF139Q8WU17 664 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 SLC35F5Q8WV83 523 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 ERLEC1Q96DZ1 483 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 P2RY11Q96G91 374 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 ARRDC1-AS1Q9H2J1 176 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 SEMA4GQ9NTN9 838 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 EBF1Q9UH73 591 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 SFMBT1Q9UHJ3 866 aa14.89□□□□□ -0.03
GPN3-201ENST00000228827 ZNF510Q9Y2H8 683 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms