RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 MRPS6P82932 125 aaKnown RBP25.9■■□□□ 1.74
RUNDC3A-201ENST00000225441 SLC18A2Q05940 514 aa25.9■■□□□ 1.74
RUNDC3A-201ENST00000225441 INCA1Q0VD86 236 aa25.9■■□□□ 1.74
RUNDC3A-201ENST00000225441 CATSPER4Q7RTX7 472 aa25.9■■□□□ 1.74
RUNDC3A-201ENST00000225441 SPATA18Q8TC71 538 aa25.9■■□□□ 1.74
RUNDC3A-201ENST00000225441 WNT8BQ93098 351 aa25.9■■□□□ 1.74
RUNDC3A-201ENST00000225441 TBC1D31Q96DN5 1066 aa25.9■■□□□ 1.74
RUNDC3A-201ENST00000225441 ELOVL4Q9GZR5 314 aa25.9■■□□□ 1.74
RUNDC3A-201ENST00000225441 MYCP01106 439 aaPredicted RBP25.89■■□□□ 1.74
RUNDC3A-201ENST00000225441 MT-ND3P03897 115 aa25.89■■□□□ 1.74
RUNDC3A-201ENST00000225441 BBS9Q3SYG4 887 aa25.89■■□□□ 1.74
RUNDC3A-201ENST00000225441 BOLA3Q53S33 107 aa25.89■■□□□ 1.74
RUNDC3A-201ENST00000225441 KCNT1Q5JUK3 1230 aa25.89■■□□□ 1.74
RUNDC3A-201ENST00000225441 KIF2BQ8N4N8 673 aa25.89■■□□□ 1.74
RUNDC3A-201ENST00000225441 CXorf38Q8TB03 319 aa25.89■■□□□ 1.74
RUNDC3A-201ENST00000225441 TEKT4Q8WW24 435 aa25.89■■□□□ 1.74
RUNDC3A-201ENST00000225441 TMEM40Q8WWA1 233 aa25.89■■□□□ 1.74
RUNDC3A-201ENST00000225441 SLC44A1Q8WWI5 657 aa25.89■■□□□ 1.74
RUNDC3A-201ENST00000225441 SDCBP2Q9H190 292 aa25.89■■□□□ 1.74
RUNDC3A-201ENST00000225441 SLCO1B3Q9NPD5 702 aa25.89■■□□□ 1.74
RUNDC3A-201ENST00000225441 BATF3Q9NR55 127 aa25.89■■□□□ 1.74
RUNDC3A-201ENST00000225441 IKBKGQ9Y6K9 419 aa25.89■■□□□ 1.74
RUNDC3A-201ENST00000225441 DPYSL4O14531 572 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 TMEM63AO94886 807 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 DHRS4L1P0CG22 281 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 CXCL8P10145 99 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 TGM2P21980 687 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 KCNJ11Q14654 390 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 CTU1Q7Z7A3 348 aaKnown RBP25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 ZNF276Q8N554 614 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 FAM71DQ8N9W8 422 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 DEFB118Q96PH6 123 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 TBCBQ99426 244 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 TLE6Q9H808 572 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 SAE1Q9UBE0 346 aaPredicted RBP25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 BARX2Q9UMQ3 279 aaPredicted RBP25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 TRPV2Q9Y5S1 764 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 TEX264Q9Y6I9 313 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 LACTBL1A8MY62 500 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 M0QZ92 97 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 STAG3L1P0CL83 205 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 DESP17661 470 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 MAGEA6P43360 314 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 SNX16P57768 344 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 WASHC2DQ5SRD0 308 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 DARS2Q6PI48 645 aaKnown RBP25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 LCLAT1Q6UWP7 414 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 CAPN12Q6ZSI9 719 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 STAMBPL1Q96FJ0 436 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 WDR83Q9BRX9 315 aaKnown RBP25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 RNF208Q9H0X6 261 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 STARD7Q9NQZ5 370 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 ITGA11Q9UKX5 1188 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 STK38LQ9Y2H1 464 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 CDY2AQ9Y6F7 541 aa25.88■■□□□ 1.73
RUNDC3A-201ENST00000225441 C2CD4BA6NLJ0 364 aa25.87■■□□□ 1.73
RUNDC3A-201ENST00000225441 M0QYV0 167 aa25.87■■□□□ 1.73
RUNDC3A-201ENST00000225441 TRDMT1O14717 391 aaKnown RBP25.87■■□□□ 1.73
RUNDC3A-201ENST00000225441 RAP1GAPP47736 663 aa25.87■■□□□ 1.73
RUNDC3A-201ENST00000225441 EMC1Q8N766 993 aa25.87■■□□□ 1.73
RUNDC3A-201ENST00000225441 MAB21L3Q8N8X9 362 aa25.87■■□□□ 1.73
RUNDC3A-201ENST00000225441 SLC43A3Q8NBI5 491 aa25.87■■□□□ 1.73
RUNDC3A-201ENST00000225441 TCP10LQ8TDR4 215 aa25.87■■□□□ 1.73
RUNDC3A-201ENST00000225441 LRRC39Q96DD0 335 aa25.87■■□□□ 1.73
RUNDC3A-201ENST00000225441 APOPT1Q96IL0 206 aa25.87■■□□□ 1.73
RUNDC3A-201ENST00000225441 MANSC1Q9H8J5 431 aa25.87■■□□□ 1.73
RUNDC3A-201ENST00000225441 PCSK1NQ9UHG2 260 aa25.87■■□□□ 1.73
RUNDC3A-201ENST00000225441 ZNF180Q9UJW8 692 aa25.87■■□□□ 1.73
RUNDC3A-201ENST00000225441 C2CD2Q9Y426 696 aa25.87■■□□□ 1.73
RUNDC3A-201ENST00000225441 NFICP08651 508 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 CD48P09326 243 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 SETSIPP0DME0 302 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 PTK7Q13308 1070 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 FAM102AQ5T9C2 384 aaPredicted RBP25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 NLRP9Q7RTR0 991 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 TRIM42Q8IWZ5 723 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 CEP120Q8N960 986 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 SPOCK2Q92563 424 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 HSPH1Q92598 858 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 CALN1Q9BXU9 219 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 SMYD3Q9H7B4 428 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 TRMT13Q9NUP7 481 aaKnown RBP25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 TJP2Q9UDY2 1190 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 NOD1Q9Y239 953 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 KLF11O14901 512 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 PRPSAP2O60256 369 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 ITGB3P05106 788 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 HOXA11P31270 313 aaPredicted RBP25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 NEK3P51956 506 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 CDH8P55286 799 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 BASP1P80723 227 aaKnown RBP25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 RBP5P82980 135 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 LGSNQ5TDP6 509 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 N4BP2L2Q92802 583 aaPredicted RBP25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 RNF157Q96PX1 679 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 TRIM55Q9BYV6 548 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 OGDHLQ9ULD0 1010 aa25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 MTO1Q9Y2Z2 717 aaKnown RBP25.86■■□□□ 1.73
RUNDC3A-201ENST00000225441 CEP350Q5VT06 3117 aa25.85■■□□□ 1.73
RUNDC3A-201ENST00000225441 DNAJC6O75061 913 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms