RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CDO1Q16878 200 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 UNC5AQ6ZN44 842 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 ALYREFQ86V81 257 aaKnown RBP13.8□□□□□ -0.2
SRP54-201ENST00000216774 ARMC2Q8NEN0 867 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 PCDH19Q8TAB3 1148 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 GSDMBQ8TAX9 411 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 CCDC110Q8TBZ0 833 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 SLC16A10Q8TF71 515 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 TRAPPC12Q8WVT3 735 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 SPATA33Q96N06 139 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 TSPAN16Q9UKR8 245 aa13.8□□□□□ -0.2
SRP54-201ENST00000216774 C2orf71A6NGG8 1288 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 F8W8V4 182 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 CAPN9O14815 690 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 PEX10O60683 326 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 SNNO75324 88 aaPredicted RBP13.79□□□□□ -0.2
SRP54-201ENST00000216774 GCATO75600 419 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 PFKMP08237 780 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 TPSB2P20231 275 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 GCLCP48506 637 aaPredicted RBP13.79□□□□□ -0.2
SRP54-201ENST00000216774 CLCN3P51790 818 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 TMEM132DQ14C87 1099 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 TPSAB1Q15661 275 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 CHI3L2Q15782 390 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 IRGCQ6NXR0 463 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 OLFML1Q6UWY5 402 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 CYS1Q717R9 158 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 ARCQ7LC44 396 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 NUDCD3Q8IVD9 361 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 FAM136AQ96C01 138 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 PIWIL1Q96J94 861 aaKnown RBP13.79□□□□□ -0.2
SRP54-201ENST00000216774 ZNF668Q96K58 619 aaPredicted RBP13.79□□□□□ -0.2
SRP54-201ENST00000216774 EBNA1BP2Q99848 306 aaKnown RBP13.79□□□□□ -0.2
SRP54-201ENST00000216774 NT5C1AQ9BXI3 368 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 IFT122Q9HBG6 1241 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 SMYD2Q9NRG4 433 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 ARMCX1Q9P291 453 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 ZNF212Q9UDV6 495 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 SKIP12755 728 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 CNTFP26441 200 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 SDC4P31431 198 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 SESN3P58005 492 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 RBP5P82980 135 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 GRIK3Q13003 919 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 STXBP5Q5T5C0 1151 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 TIFABQ6ZNK6 161 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 LRRC74BQ6ZQY2 392 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 DPH6Q7L8W6 267 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 CRLF3Q8IUI8 442 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 PDCD7Q8N8D1 485 aaKnown RBP13.79□□□□□ -0.2
SRP54-201ENST00000216774 FAM172AQ8WUF8 416 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 WDR60Q8WVS4 1066 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 ACAP3Q96P50 834 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 SIKE1Q9BRV8 207 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 MECRQ9BV79 373 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 PDZD7Q9H5P4 517 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 XAB2Q9HCS7 855 aaKnown RBP13.79□□□□□ -0.2
SRP54-201ENST00000216774 C2CD2Q9Y426 696 aa13.79□□□□□ -0.2
SRP54-201ENST00000216774 TBX10O75333 385 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 GRAP2O75791 330 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 C22orf31O95567 290 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 BPGMP07738 259 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 LINGO3P0C6S8 592 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 CSH1P0DML2 217 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 CSH2P0DML3 217 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 ZFXP17010 805 aaPredicted RBP13.78□□□□□ -0.2
SRP54-201ENST00000216774 PSEN1P49768 467 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 SNX16P57768 344 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 AP1B1Q10567 949 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 AMHR2Q16671 573 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 SLC10A6Q3KNW5 377 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 HSF5Q4G112 596 aaPredicted RBP13.78□□□□□ -0.2
SRP54-201ENST00000216774 FAXCQ5TGI0 409 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 SCYL2Q6P3W7 929 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 IFNLR1Q8IU57 520 aaPredicted RBP13.78□□□□□ -0.2
SRP54-201ENST00000216774 ARID3BQ8IVW6 561 aaPredicted RBP13.78□□□□□ -0.2
SRP54-201ENST00000216774 TMEM130Q8N3G9 435 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 NRG4Q8WWG1 115 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 SIGLEC10Q96LC7 697 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 SNRNP25Q9BV90 132 aaKnown RBP13.78□□□□□ -0.2
SRP54-201ENST00000216774 GCOM2Q9BZD3 368 aaPredicted RBP13.78□□□□□ -0.2
SRP54-201ENST00000216774 SLC13A1Q9BZW2 595 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 NGRNQ9NPE2 291 aaKnown RBP13.78□□□□□ -0.2
SRP54-201ENST00000216774 B2RBV5 119 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 PIK3R2O00459 728 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 SETSIPP0DME0 302 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 NR2C2P49116 596 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 IRX1P78414 480 aaPredicted RBP13.78□□□□□ -0.2
SRP54-201ENST00000216774 SLC6A3Q01959 620 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 WASHC5Q12768 1159 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 BMPR2Q13873 1038 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 GOLGA7BQ2TAP0 167 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 DNAL1Q4LDG9 190 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 ZNF534Q76KX8 674 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 NET1Q7Z628 596 aaPredicted RBP13.78□□□□□ -0.2
SRP54-201ENST00000216774 SESTD1Q86VW0 696 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 NT5DC4Q86YG4 428 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 NDUFAF2Q8N183 169 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 PPFIBP2Q8ND30 876 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 SCG3Q8WXD2 468 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms