RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 ATP8B3O60423 1300 aa20■□□□□ 0.79
TRAPPC6A-201ENST00000006275 UPK3BL1B0FP48 263 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 UPK3BL2E5RIL1 263 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 CLDN5O00501 218 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 TRIM66O15016 1216 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 MBD3O95983 291 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 CD58P19256 250 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 PDE6CP51160 858 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 MARSP56192 900 aaKnown RBP19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 INCA1Q0VD86 236 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 ORC1Q13415 861 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 BYSLQ13895 437 aaKnown RBP19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 GAB4Q2WGN9 574 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 CREBRFQ8IUR6 639 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 TRIM59Q8IWR1 403 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 CHCHD4Q8N4Q1 142 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 HMGB4Q8WW32 186 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 TATDN2Q93075 761 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 ZNF518BQ9C0D4 1074 aa19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 MBD1Q9UIS9 605 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC6A-201ENST00000006275 SGK1O00141 431 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 ITPKAP23677 461 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 TIE1P35590 1138 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 CETN1Q12798 172 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 SPDYCQ5MJ68 293 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 PROSER1Q86XN7 944 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 CRYBG2Q8N1P7 616 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 PGBD3Q8N328 593 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 IL17RCQ8NAC3 791 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 SPATA17Q96L03 361 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 C8orf48Q96LL4 319 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 CEP295NLQ96MC4 621 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 MED15Q96RN5 788 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 NT5C1AQ9BXI3 368 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 DNAI2Q9GZS0 605 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 FSCN3Q9NQT6 498 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 PILRBQ9UKJ0 227 aa19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.98■□□□□ 0.79
TRAPPC6A-201ENST00000006275 F8VP50 259 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 LEFTY2O00292 366 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 PMM2O15305 246 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 OPHN1O60890 802 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 CILPO75339 1184 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 CYP17A1P05093 508 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 HOXD12P35452 270 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 GFPT1Q06210 699 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 KCNH2Q12809 1159 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 MAP7D1Q3KQU3 841 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 HSF5Q4G112 596 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 EOGTQ5NDL2 527 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 DENND5BQ6ZUT9 1274 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 FAM35AQ86V20 835 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 SFTPA1Q8IWL2 248 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 TWNKQ96RR1 684 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 SLC6A14Q9UN76 642 aa19.97■□□□□ 0.79
TRAPPC6A-201ENST00000006275 TCRBV21S2A2A0A5A6 115 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 P4HA2O15460 535 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 KAT7O95251 611 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 AFPP02771 609 aaKnown RBP19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 APODP05090 189 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 CCDC130P13994 396 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 ERCC5P28715 1186 aaPredicted RBP19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 SLC6A11P48066 632 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 CACNA2D1P54289 1103 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 FAM193AP78312 1265 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 LRMPQ12912 555 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 DUOXA1Q1HG43 343 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 ZNF423Q2M1K9 1284 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 ZNF394Q53GI3 561 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 C19orf48Q6RUI8 117 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 RBM43Q6ZSC3 357 aaKnown RBP19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 PAQR9Q6ZVX9 377 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 TTC39CQ8N584 583 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 CEP76Q8TAP6 659 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 SMARCD1Q96GM5 515 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 PNKPQ96T60 521 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 CISHQ9NSE2 258 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 FAM49BQ9NUQ9 324 aa19.96■□□□□ 0.79
TRAPPC6A-201ENST00000006275 ACACAQ13085 2346 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 FAM221BA6H8Z2 402 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 AP5Z1O43299 807 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 AP1G2O75843 785 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 ZXDBP98169 803 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 MESP2Q0VG99 397 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 DHCR24Q15392 516 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 EMC10Q5UCC4 262 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 PEAR1Q5VY43 1037 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 FUKQ8N0W3 1084 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 C12orf29Q8N999 325 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 SLC2A14Q8TDB8 520 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 ARID3AQ99856 593 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 FAM124BQ9H5Z6 455 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 ZDHHC4Q9NPG8 344 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 TMEM30AQ9NV96 361 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 EHD2Q9NZN4 543 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 TRPM5Q9NZQ8 1165 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 GPSM3Q9Y4H4 160 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 ITPR1Q14643 2758 aa19.95■□□□□ 0.78
TRAPPC6A-201ENST00000006275 MYH10P35580 1976 aa19.94■□□□□ 0.78
TRAPPC6A-201ENST00000006275 SLC9A3R1O14745 358 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms