RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Cdkl4Q3TZA2 342 aa17.04■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Stard3Q61542 446 aa17.04■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Naif1Q6PFD7 327 aa17.04■□□□□ 0.32
Ubr3-202ENSMUST00000112251 NrrosQ8BMT4 693 aa17.04■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Ddi1Q9DAF3 408 aa17.04■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Tm9sf1Q9DBU0 606 aa17.04■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Cog8Q9JJA2 640 aa17.04■□□□□ 0.32
Ubr3-202ENSMUST00000112251 D1Pas1P16381 660 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Polr1cP52432 346 aaKnown RBP17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 HexdcQ3U4H6 486 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Als2clQ60I26 952 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 CrkQ64010 304 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Epm2aQ9WUA5 330 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Ap4b1Q9WV76 738 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Cyp3a25O09158 503 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Rps6ka3P18654 740 aaKnown RBP17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 RxrgP28705 463 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Kcnma1Q08460 1209 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Nr6a1Q64249 495 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Fam163aQ8CAA5 168 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Zmynd11Q8R5C8 602 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Tp53P02340 387 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Clec12aQ504P2 267 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Nr1h2Q60644 446 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Spice1Q8C804 860 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 SntnQ8C9X1 147 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Aldh4a1Q8CHT0 562 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Stoml2Q99JB2 353 aaKnown RBP17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Mei1Q9D4I2 1268 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Spag6Q9JLI7 507 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Kcnj2P35561 428 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Tgfbrap1Q3UR70 860 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Q8BGD0 127 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Pcyox1lQ8C7K6 495 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Mtmr6Q8VE11 617 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Pdk3Q922H2 415 aaKnown RBP17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 RnmtQ9D0L8 465 aaKnown RBP17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Tagln3Q9R1Q8 199 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Snx12O70493 165 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 P4ha2Q60716 537 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Magee1Q6PCZ4 918 aaKnown RBP17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Actr8Q8R2S9 624 aaKnown RBP17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Wdr73Q9CWR1 371 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Abcc12Q80WJ6 1366 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 AdssP46664 456 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 RogdiQ3TDK6 287 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Slc2a13Q3UHK1 637 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Zzz3Q6KAQ7 910 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Crls1Q80ZM8 303 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Cxcl16Q8BSU2 246 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Ptpn7Q8BUM3 359 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Nob1Q8BW10 403 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Fmo2Q8K2I3 535 aa17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Add3Q9QYB5 706 aaKnown RBP17.03■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Gm43518A0A0G2JGB6 165 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Rad21l1A2AU37 552 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 CtshP49935 333 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Serac1Q3U213 654 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Rbm15bQ6PHZ5 887 aaKnown RBP17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Slitrk1Q810C1 696 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Q810S2 196 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Tyw1Q8BJM7 721 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Lpcat2Q8BYI6 544 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Epm2aip1Q8VEH5 606 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Phtf1Q9QZ09 761 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Atp9aO70228 1047 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Pacs1Q8K212 961 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Limd1Q9QXD8 668 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 WizO88286 1684 aaKnown RBP17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 B020011L13RikA0A087WQI7 412 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 TsxP70675 144 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Otud5Q3U2S4 566 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Calm5Q6W3E0 140 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Ube2q1Q7TSS2 422 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 IqchQ9D2K4 1071 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Mid2Q9QUS6 705 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Prkab1Q9R078 270 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Sema3eP70275 775 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Defa17Q64016 82 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Unc5clQ6R653 518 aa17.02■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Slc2a7P0C6A1 513 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Crabp2P22935 138 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Nfkb1P25799 971 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Vwa3aQ3UVV9 1148 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Tmem260Q8BMD6 703 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Ndufb5Q9CQH3 189 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 A0A1L1ST33 502 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Ttc23lA6H6E9 458 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Mroh5E9PUJ8 762 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Sult3a1O35403 293 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 AurkaP97477 395 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Pik3r3Q64143 461 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Zc3h11aQ6NZF1 792 aaKnown RBP17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 SucoQ8C341 1250 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Rilpl2Q99LE1 197 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Q9D8N1 392 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 DmgdhQ9DBT9 869 aa17.02■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Slfn9B1ARD6 910 aa17.01■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Trim69Q80X56 500 aa17.01■□□□□ 0.31
Ubr3-202ENSMUST00000112251 Btbd7Q8CFE5 1130 aa17.01■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms