RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Snx13Q6PHS6 957 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Olfr1198Q7TR12 308 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Q80ZQ3 298 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Haus4Q8BFT2 363 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Lrfn3Q8BLY3 626 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Anapc5Q8BTZ4 740 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Ubr7Q8BU04 425 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Uba3Q8C878 462 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Slc26a6Q8CIW6 758 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 PinlypQ9CQD7 212 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 CatsperzQ9CQP8 194 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Mrpl2Q9D773 306 aaKnown RBP12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Prl5a1Q9JII2 230 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cacng3Q9JJV5 315 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Cyp39a1Q9JKJ9 470 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 Angptl2Q9R045 493 aa12.71□□□□□ -0.37
Ccdc28a-202ENSMUST00000080860 SpegQ62407 3262 aa12.71□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Apol6B7ZC55 329 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Daw1D3Z7A5 415 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Gm20431E9PY39 371 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Cyp4a14O35728 507 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Pip4k2aO70172 405 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Nr3c1P06537 783 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Atxn1lP0C7T6 687 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 SftpdP50404 374 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 TankP70347 448 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 GscQ02591 256 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Tcerg1lQ3B807 590 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Usp30Q3UN04 517 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 CttnQ60598 546 aaKnown RBP12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Pacsin1Q61644 441 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Pabpc2Q62029 628 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Lrig3Q6P1C6 1117 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Tra2aQ6PFR5 281 aaKnown RBP12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Lsm8Q6ZWM4 96 aaKnown RBP12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Trim62Q80V85 475 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Acad11Q80XL6 779 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Nop9Q8BMC4 636 aaKnown RBP12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Arhgap18Q8K0Q5 663 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Oas1cQ924S2 362 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Ndufb5Q9CQH3 189 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Alg14Q9D081 217 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Erp44Q9D1Q6 406 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Eef1akmt2Q9D853 244 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Spry1Q9QXV9 313 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 NcdnQ9Z0E0 729 aa12.7□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Osbpl7A2A716 963 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 9230113P08RikD3YWX3 137 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Gm5415E9PXF3 478 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Vmn1r55E9Q8I6 310 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Gm3336J3QMQ6 198 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Men1O88559 611 aaKnown RBP12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Hoxa9P09631 271 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Pbx1P41778 430 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 IvlP48997 467 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Apobec1P51908 229 aaKnown RBP12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 CebpzP53569 1052 aaKnown RBP12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Timm13P62075 95 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Ttc39dQ0VF76 604 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Rnf113a2Q14B01 337 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Zbtb48Q1H9T6 681 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Klra9Q2TJJ8 266 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Dpcr1Q3TNW5 500 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Nfe2l2Q60795 597 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Mef2dQ63943 514 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Sp9Q64HY3 484 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Klhl23Q6GQU2 558 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Lrrn2Q6PHP6 730 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Zdhhc17Q80TN5 632 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Znf423Q80TS5 1292 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Gm5622Q810Q0 167 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 LarsQ8BMJ2 1178 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Q8CD60 292 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Adgrf1Q8VEC3 908 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Mettl13Q91YR5 698 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Rilpl2Q99LE1 197 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Abcb6Q9DC29 842 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Htra2Q9JIY5 458 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Hyou1Q9JKR6 999 aaKnown RBP12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Slc2a5Q9WV38 501 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Ate1Q9Z2A5 516 aa12.69□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Sec14l1A8Y5H7 715 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Cisd3B1AR13 137 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 A930018M24RikB7ZMY3 218 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Rasal2E9PW37 1286 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 FancfE9Q5Z5 343 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Sept7O55131 436 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Cd8aP01731 247 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 InhbcP55104 352 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Neurog1P70660 244 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Rgs9bpQ148R9 237 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Zfyve27Q3TXX3 415 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Papss1Q60967 624 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Ovgp1Q62010 721 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Sorbs1Q62417 1290 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Mgat5bQ765H6 792 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Epb41l5Q8BGS1 731 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Tmx3Q8BXZ1 456 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Sh3rf2Q8BZT2 735 aa12.68□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Tp53inp2Q8CFU8 221 aa12.68□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms