RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SMYD2Q9NRG4 433 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 RAB6BQ9NRW1 208 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 CLEC11AQ9Y240 323 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 MAST2Q6P0Q8 1798 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 ARFGEF1Q9Y6D6 1849 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 A0A0B4J269 797 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 CRTAMO95727 393 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 APRTP07741 180 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 IL1R2P27930 398 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 SOX11P35716 441 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 RGS2P41220 211 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 COPAP53621 1224 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 SPP2Q13103 211 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 CDO1Q16878 200 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 C15orf52Q6ZUT6 534 aaKnown RBP14.26□□□□□ -0.13
SCARB2-227ENST00000640957 STKLD1Q8NE28 680 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 PPP4R1Q8TF05 950 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 FAF2Q96CS3 445 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 ZNRF3Q9ULT6 936 aa14.26□□□□□ -0.13
SCARB2-227ENST00000640957 HBS1LQ9Y450 684 aaKnown RBP14.26□□□□□ -0.13
SCARB2-227ENST00000640957 PTPRJQ12913 1337 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 hCG_1818297A0A087WSY0 165 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 SEC24DO94855 1032 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-227ENST00000640957 RBP3P10745 1247 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 RPL5P46777 297 aaKnown RBP14.25□□□□□ -0.13
SCARB2-227ENST00000640957 PRAMEP78395 509 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 MYBPC1Q00872 1141 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 CD300CQ08708 224 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 DNAL1Q4LDG9 190 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 TRIML2Q8N7C3 387 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 CHURC1Q8WUH1 139 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 ZNF668Q96K58 619 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-227ENST00000640957 XAB2Q9HCS7 855 aaKnown RBP14.25□□□□□ -0.13
SCARB2-227ENST00000640957 NFIBO00712 420 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 TBX3O15119 743 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 DNAJA2O60884 412 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 GRAP2O75791 330 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 PENKP01210 267 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-227ENST00000640957 HLA-DRAP01903 254 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 RFX1P22670 979 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 VARSP26640 1264 aaKnown RBP14.25□□□□□ -0.13
SCARB2-227ENST00000640957 GRIA1P42261 906 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 RARRES1P49788 294 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 Q3C1V9 767 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 WDR44Q5JSH3 913 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 DNAJC24Q6P3W2 148 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 CASC4Q6P4E1 433 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 DARS2Q6PI48 645 aaKnown RBP14.25□□□□□ -0.13
SCARB2-227ENST00000640957 SNX31Q8N9S9 440 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 BSNDQ8WZ55 320 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 ZNF778Q96MU6 729 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 CATSPER2Q96P56 530 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 TMEM206Q9H813 350 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 EHMT1Q9H9B1 1298 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 TMEM8AQ9HCN3 771 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 TUFT1Q9NNX1 390 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 APOBEC2Q9Y235 224 aaKnown RBP14.25□□□□□ -0.13
SCARB2-227ENST00000640957 PCDHB2Q9Y5E7 798 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 LAMB1P07942 1786 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 SIN3BO75182 1162 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 TRMUO75648 421 aaKnown RBP14.25□□□□□ -0.13
SCARB2-227ENST00000640957 CSH1P0DML2 217 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 CSH2P0DML3 217 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 MAGEA8P43361 318 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 RXRGP48443 463 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 EIF3EP60228 445 aaKnown RBP14.25□□□□□ -0.13
SCARB2-227ENST00000640957 LMNB2Q03252 620 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 TFDP3Q5H9I0 405 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 PPM1JQ5JR12 505 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 DACT2Q5SW24 774 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 TNS4Q8IZW8 715 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 APOBEC3GQ9HC16 384 aaKnown RBP14.25□□□□□ -0.13
SCARB2-227ENST00000640957 KCNK4Q9NYG8 393 aa14.25□□□□□ -0.13
SCARB2-227ENST00000640957 GNEQ9Y223 722 aaKnown RBP14.25□□□□□ -0.13
SCARB2-227ENST00000640957 MRPL11Q9Y3B7 192 aaKnown RBP14.25□□□□□ -0.13
SCARB2-227ENST00000640957 CROCCQ5TZA2 2017 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 H7C0C1 242 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 PSTPIP1O43586 416 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 ITGB5P18084 799 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 ATP5OP48047 213 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 NOMO3P69849 1222 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 FASTKD1Q53R41 847 aaKnown RBP14.24□□□□□ -0.13
SCARB2-227ENST00000640957 SH2D4BQ5SQS7 431 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 SH3PXD2AQ5TCZ1 1133 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 STRIP1Q5VSL9 837 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 IL31Q6EBC2 164 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 CES3Q6UWW8 571 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 RNF168Q8IYW5 571 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-227ENST00000640957 NAT8LQ8N9F0 302 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 TTC13Q8NBP0 860 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 SPATA18Q8TC71 538 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 UNKQ9C0B0 810 aaKnown RBP14.24□□□□□ -0.13
SCARB2-227ENST00000640957 SEL1LQ9UBV2 794 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 SHOC2Q9UQ13 582 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 SNCAIPQ9Y6H5 919 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 TAF1LQ8IZX4 1826 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 TRIM43BA6NCK2 446 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 WDR64B1ANS9 1081 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 COL6A2P12110 1019 aa14.24□□□□□ -0.13
SCARB2-227ENST00000640957 RFC1P35251 1148 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms