RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 TFDP2Q14188 446 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 TTC23Q5W5X9 447 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 MYO1HQ8N1T3 1032 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 TSEN2Q8NCE0 465 aaKnown RBP8.53□□□□□ -1.04
NECAP1-227ENST00000640648 CLHC1Q8NHS4 586 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 SPIRE2Q8WWL2 714 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 TLCD1Q96CP7 247 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 ZBTB18Q99592 522 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 C7orf25Q9BPX7 421 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 C17orf80Q9BSJ5 609 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 TEX12Q9BXU0 123 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 GPN3Q9UHW5 284 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-227ENST00000640648 DBR1Q9UK59 544 aaKnown RBP8.53□□□□□ -1.04
NECAP1-227ENST00000640648 OVOS2A0A0G2JMS6 1433 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 COL15A1P39059 1388 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 KCNQ2O43526 872 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 RALBP11234 206 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 PRDX6P30041 224 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 CDK18Q07002 472 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 CSTF3Q12996 717 aaKnown RBP8.53□□□□□ -1.04
NECAP1-227ENST00000640648 EEPD1Q7L9B9 569 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 GALNT4Q8N4A0 578 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 KYQ8NBH2 561 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 CYGBQ8WWM9 190 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 GLMNQ92990 594 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 FAM118BQ9BPY3 351 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 EMSYQ7Z589 1322 aa8.53□□□□□ -1.04
NECAP1-227ENST00000640648 LOC110117498-PIK3R3F6TDL0 507 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 NCAM2O15394 837 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 APBA3O96018 575 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 GLI1P08151 1106 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 RAG1P15918 1043 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 ATF4P18848 351 aaPredicted RBP8.52□□□□□ -1.04
NECAP1-227ENST00000640648 OTUD4Q01804 1114 aaKnown RBP8.52□□□□□ -1.04
NECAP1-227ENST00000640648 HIF1AQ16665 826 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 CDO1Q16878 200 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 ARL13BQ3SXY8 428 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 KIAA0408Q6ZU52 694 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 ENOSF1Q7L5Y1 443 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 OR7A2PQ8NGA2 310 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 PIK3R3Q92569 461 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 RORBQ92753 470 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 CINPQ9BW66 212 aaPredicted RBP8.52□□□□□ -1.04
NECAP1-227ENST00000640648 TMEM120AQ9BXJ8 343 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 CYP4F12Q9HCS2 524 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 S100A14Q9HCY8 104 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 KLHL3Q9UH77 587 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 CHORDC1Q9UHD1 332 aaPredicted RBP8.52□□□□□ -1.04
NECAP1-227ENST00000640648 PFDN2Q9UHV9 154 aa8.52□□□□□ -1.04
NECAP1-227ENST00000640648 GTPBP10A4D1E9 387 aaKnown RBP8.52□□□□□ -1.05
NECAP1-227ENST00000640648 TM7SF2O76062 418 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 ZBTB11O95625 1053 aaPredicted RBP8.52□□□□□ -1.05
NECAP1-227ENST00000640648 RPL17P18621 184 aaKnown RBP8.52□□□□□ -1.05
NECAP1-227ENST00000640648 SOX5P35711 763 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 CAPRIN1Q14444 709 aaKnown RBP8.52□□□□□ -1.05
NECAP1-227ENST00000640648 LONRF1Q17RB8 773 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 DHRSXQ8N5I4 330 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 GOLM1Q8NBJ4 401 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 KCTD6Q8NC69 237 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 TMCO6Q96DC7 493 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 CYP4F11Q9HBI6 524 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 TUFT1Q9NNX1 390 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.52□□□□□ -1.05
NECAP1-227ENST00000640648 H0YJX3 145 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 FCHO1O14526 889 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 SLC16A3O15427 465 aaKnown RBP8.52□□□□□ -1.05
NECAP1-227ENST00000640648 FECHP22830 423 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 ME2P23368 584 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 FASP25445 335 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 TP53BP2Q13625 1128 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 NTRK3Q16288 839 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 FBXL16Q8N461 479 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 C19orf18Q8NEA5 215 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 HELQQ8TDG4 1101 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 DEPDC1BQ8WUY9 529 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 KLHL32Q96NJ5 620 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 RBM15Q96T37 977 aaKnown RBP eCLIP8.52□□□□□ -1.05
NECAP1-227ENST00000640648 PPP1R16BQ96T49 567 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 KIAA1683Q9H0B3 1180 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 HIPK3Q9H422 1215 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 RUBCNLQ9H714 662 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 DYRK4Q9NR20 520 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 ENOPH1Q9UHY7 261 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 ZNF510Q9Y2H8 683 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 A6NJR5 290 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 F5H6K3 240 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 GSC2O15499 205 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 EXTL3O43909 919 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 COILP38432 576 aaPredicted RBP8.52□□□□□ -1.05
NECAP1-227ENST00000640648 VAMP7P51809 220 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 PLOD1Q02809 727 aaPredicted RBP8.52□□□□□ -1.05
NECAP1-227ENST00000640648 KLRC3Q07444 240 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 IFRD2Q12894 506 aaPredicted RBP8.52□□□□□ -1.05
NECAP1-227ENST00000640648 ZBED5Q49AG3 693 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 FOXR2Q6PJQ5 311 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 TMEM270Q6UE05 265 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 CCNJLQ8IV13 435 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 CCNYQ8ND76 341 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 TBC1D16Q8TBP0 767 aa8.52□□□□□ -1.05
NECAP1-227ENST00000640648 SHCBP1LQ9BZQ2 653 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms