RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 SNF8Q96H20 258 aa11.46□□□□□ -0.58
VPS8-227ENST00000625842 GAD1Q99259 594 aa11.46□□□□□ -0.58
VPS8-227ENST00000625842 SLC39A8Q9C0K1 460 aa11.46□□□□□ -0.58
VPS8-227ENST00000625842 UBA2Q9UBT2 640 aaPredicted RBP11.46□□□□□ -0.58
VPS8-227ENST00000625842 TADA3O75528 432 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 CATP04040 527 aaKnown RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 ATP6V1C1P21283 382 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 PBLDP30039 288 aaPredicted RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 PIK3CGP48736 1102 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 DUSP3P51452 185 aaPredicted RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 MLLT1Q03111 559 aaPredicted RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 IFT88Q13099 833 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 C6orf10Q5SRN2 563 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 SRLQ86TD4 932 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 UNC93AQ86WB7 457 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 METTL21AQ8WXB1 218 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 RERGQ96A58 199 aaPredicted RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 BBS2Q9BXC9 721 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 TRIM9Q9C026 710 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 KCNQ5Q9NR82 932 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 SCHIP1Q9P0W5 487 aaPredicted RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 CDH9Q9ULB4 789 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 RAD54BQ9Y620 910 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 KRT33AO76009 404 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 DSELQ8IZU8 1212 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 ZNF614Q8N883 585 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 OTULINQ96BN8 352 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 KLRG1Q96E93 195 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 RMDN2Q96LZ7 410 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 PHF20Q9BVI0 1012 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 PRRG4Q9BZD6 226 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 PDGFDQ9GZP0 370 aaPredicted RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 CAPN10Q9HC96 672 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 C20orf96Q9NUD7 363 aaPredicted RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 A0A1W2PQC6 194 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 APRTP07741 180 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 EEF1B2P24534 225 aaKnown RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 CDC16Q13042 620 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 PDIA2Q13087 525 aaKnown RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 TSGA10IPQ3SY00 556 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 XKR4Q5GH76 650 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 AGAP9Q5VTM2 703 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 PDE12Q6L8Q7 609 aaKnown RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 STK40Q8N2I9 435 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 AIFM3Q96NN9 605 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 MCEEQ96PE7 176 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 MTMR12Q9C0I1 747 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 GOLPH3LQ9H4A5 285 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 MRTO4Q9UKD2 239 aaKnown RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 MAPRE3Q9UPY8 281 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 PCDHGB3Q9Y5G1 929 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 CROCC2H7BZ55 1655 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 TBC1D3DA0A087WVF3 549 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 TBC1D3IA0A087WXS9 549 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 TBC1D3EA0A087X179 549 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 TBC1D3KA0A087X1G2 549 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 ANO9A1A5B4 782 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 TBC1D3FA6NER0 549 aaPredicted RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 TBC1D3LB9A6J9 549 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 BTBD19C9JJ37 291 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 TBC1D3HP0C7X1 549 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 ESRRAP11474 423 aaPredicted RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 SESN3P58005 492 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 MRPS15P82914 257 aaKnown RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 SP2Q02086 613 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 ATP13A4Q4VNC1 1196 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 COBLL1Q53SF7 1204 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 TBC1D3GQ6DHY5 549 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 TBC1D3CQ6IPX1 549 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 IFNLR1Q8IU57 520 aaPredicted RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 TBC1D3Q8IZP1 549 aaPredicted RBP11.45□□□□□ -0.58
VPS8-227ENST00000625842 LGI2Q8N0V4 545 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 TMEM176AQ96HP8 235 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 RMND5AQ9H871 391 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 SNX5Q9Y5X3 404 aa11.45□□□□□ -0.58
VPS8-227ENST00000625842 NEMP2A6NFY4 417 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 MGAT4DA6NG13 374 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 NFIBO00712 420 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 KRT8P05787 483 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 BLVRAP53004 296 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 ELP6Q0PNE2 266 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 RESTQ13127 1097 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 DHX34Q14147 1143 aaKnown RBP11.44□□□□□ -0.58
VPS8-227ENST00000625842 ARID5BQ14865 1188 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 LLGL1Q15334 1064 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 NDUFA9Q16795 377 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 LRRC8EQ6NSJ5 796 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 LRRC49Q8IUZ0 686 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 GRAMD1CQ8IYS0 662 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 C18orf25Q96B23 403 aaPredicted RBP11.44□□□□□ -0.58
VPS8-227ENST00000625842 FEM1CQ96JP0 617 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 RAB6BQ9NRW1 208 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 NDRG2Q9UN36 371 aaKnown RBP11.44□□□□□ -0.58
VPS8-227ENST00000625842 BCL9O00512 1426 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 ADGRB2O60241 1585 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 A0A087WWV3 80 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 SMIM35A0A1B0GVV1 85 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 PMPCBO75439 489 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 OR6A2O95222 327 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms