RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 RABEP2Q9H5N1 569 aa8.14□□□□□ -1.11
NEK3-207ENST00000617054 VIPAS39Q9H9C1 493 aa8.14□□□□□ -1.11
NEK3-207ENST00000617054 IGSF5Q9NSI5 407 aa8.14□□□□□ -1.11
NEK3-207ENST00000617054 DDX56Q9NY93 547 aaKnown RBP8.14□□□□□ -1.11
NEK3-207ENST00000617054 FOXO6A8MYZ6 492 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 BANF1O75531 89 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 PIAS1O75925 651 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 GNRH1P01148 92 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 SLCO1A2P46721 670 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 LHX1P48742 406 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 GPR15P49685 360 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 GSCP56915 257 aaPredicted RBP8.13□□□□□ -1.11
NEK3-207ENST00000617054 MRPS5P82675 430 aaKnown RBP8.13□□□□□ -1.11
NEK3-207ENST00000617054 GRIK3Q13003 919 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 GPS2Q13227 327 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 SLC29A2Q14542 456 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 CLUL1Q15846 466 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 NOMO2Q5JPE7 1267 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 CAPN12Q6ZSI9 719 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 TMEM173Q86WV6 379 aaPredicted RBP8.13□□□□□ -1.11
NEK3-207ENST00000617054 PLPP6Q8IY26 295 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 FAM71DQ8N9W8 422 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 MYCBPAPQ8TBZ2 947 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 PHF24Q9UPV7 400 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 BPTFQ12830 3046 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 TLDC2A0PJX2 215 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 DCDC2CA8MYV0 355 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 M0QYT0 321 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 ACSL3O95573 720 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 FYNP06241 537 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 ODC1P11926 461 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 NCAM1P13591 858 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 RPL9P32969 192 aaKnown RBP8.13□□□□□ -1.11
NEK3-207ENST00000617054 HSPA9P38646 679 aaKnown RBP8.13□□□□□ -1.11
NEK3-207ENST00000617054 SULT1E1P49888 294 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 SLC8A3P57103 927 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 YWHAZP63104 245 aaKnown RBP8.13□□□□□ -1.11
NEK3-207ENST00000617054 GPS1Q13098 491 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 CALCOCO2Q13137 446 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 MTMR3Q13615 1198 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 PPP2R5EQ16537 467 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 POLNQ7Z5Q5 900 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 TTC9BQ8N6N2 239 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 SPATA18Q8TC71 538 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 RUBCNQ92622 972 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 ANLNQ9NQW6 1124 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 AAASQ9NRG9 546 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 ETNK2Q9NVF9 386 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.13□□□□□ -1.11
NEK3-207ENST00000617054 SNX10Q9Y5X0 201 aa8.13□□□□□ -1.11
NEK3-207ENST00000617054 CAPN9O14815 690 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 SETSIPP0DME0 302 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 ATF2P15336 505 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 AARSP49588 968 aaKnown RBP eCLIP8.12□□□□□ -1.11
NEK3-207ENST00000617054 NUMBP49757 651 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 ATP1A2P50993 1020 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 SLC39A12Q504Y0 691 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 SLC26A9Q7LBE3 791 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 TP53INP2Q8IXH6 220 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 DEPDC4Q8N2C3 294 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 GOLGA6L1Q8N7Z2 621 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 PCDH19Q8TAB3 1148 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 SLC7A14Q8TBB6 771 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 ART4Q93070 314 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 FAM193BQ96PV7 902 aaPredicted RBP8.12□□□□□ -1.11
NEK3-207ENST00000617054 GPR62Q9BZJ7 368 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 EPB41L4BQ9H329 900 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 PAK6Q9NQU5 681 aaPredicted RBP8.12□□□□□ -1.11
NEK3-207ENST00000617054 ABI2Q9NYB9 513 aaPredicted RBP8.12□□□□□ -1.11
NEK3-207ENST00000617054 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.12□□□□□ -1.11
NEK3-207ENST00000617054 ANAPC5Q9UJX4 755 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 NEU2Q9Y3R4 380 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 ZNF638Q14966 1978 aaKnown RBP8.12□□□□□ -1.11
NEK3-207ENST00000617054 H0YGN5 161 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 I6L893 689 aaPredicted RBP8.12□□□□□ -1.11
NEK3-207ENST00000617054 DNM1LO00429 736 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 CREB3O43889 395 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 TADA2AO75478 443 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 GAS8O95995 478 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 GOT1P17174 413 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 KLRC2P26717 231 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 PCK1P35558 622 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 PMS2P54278 862 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 YWHAHQ04917 246 aaPredicted RBP8.12□□□□□ -1.11
NEK3-207ENST00000617054 TERF2Q15554 542 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 DDR2Q16832 855 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 TRIM60Q495X7 471 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 IZUMO3Q5VZ72 239 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.12□□□□□ -1.11
NEK3-207ENST00000617054 TAS1R1Q7RTX1 841 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 SCN4BQ8IWT1 228 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 COLGALT2Q8IYK4 626 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 ABI1Q8IZP0 508 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 PBXIP1Q96AQ6 731 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 HSFY1Q96LI6 401 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 ACBD3Q9H3P7 528 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 HIPK3Q9H422 1215 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 PCDH18Q9HCL0 1135 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 PIGVQ9NUD9 493 aa8.12□□□□□ -1.11
NEK3-207ENST00000617054 PCDHB7Q9Y5E2 793 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms