RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	PATJ	Q8NI35	1801 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	FAM186A	A6NE01	2351 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197		A0A1W2PQH9	124 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	HOXC11	O43248	304 aa	Predicted RBP	11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	TIE1	P35590	1138 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	TNFRSF4	P43489	277 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	FMO5	P49326	533 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	BCAT1	P54687	386 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	RAD23B	P54727	409 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	LRMP	Q12912	555 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	PAK1	Q13153	545 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	BYSL	Q13895	437 aa	Known RBP	11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	E2F5	Q15329	346 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	GOLGA7B	Q2TAP0	167 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	CBWD6	Q4V339	395 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	CBWD3	Q5JTY5	395 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	CBWD5	Q5RIA9	395 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	ARHGAP17	Q68EM7	881 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	NAIF1	Q69YI7	327 aa	Predicted RBP	11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	GRAMD4	Q6IC98	578 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	HTR3D	Q70Z44	454 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	MIB1	Q86YT6	1006 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	SIX6OS1	Q8N1H7	587 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	PGBD3	Q8N328	593 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	CCDC33	Q8N5R6	958 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	NAT16	Q8N8M0	369 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	ANKRD52	Q8NB46	1076 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	KCNV2	Q8TDN2	545 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	RNF139	Q8WU17	664 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	GOLGA1	Q92805	767 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	TATDN2	Q93075	761 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	RMDN1	Q96DB5	314 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	SPACA7	Q96KW9	195 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	DUSP9	Q99956	384 aa	Known RBP	11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	BBS2	Q9BXC9	721 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	UBXN6	Q9BZV1	441 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	SEMA4G	Q9NTN9	838 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	C2orf42	Q9NWW7	574 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	EBF1	Q9UH73	591 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	RASAL2	Q9UJF2	1139 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	MMP17	Q9ULZ9	603 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	CTNND2	Q9UQB3	1225 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	COQ4	Q9Y3A0	265 aa		11.53	□□□□□ -0.56
NPIPB4-222	ENST00000614197	RIF1	Q5UIP0	2472 aa	Known RBP	11.52	□□□□□ -0.56
NPIPB4-222	ENST00000614197	HHLA1	C9JL84	531 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	NEDD8-MDP1	E9PL57	170 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	BIN1	O00499	593 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	P4HA2	O15460	535 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	KLF8	O95600	359 aa	Predicted RBP	11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	TBX18	O95935	607 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	CYBB	P04839	570 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	VDR	P11473	427 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	CHKA	P35790	457 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	SLC6A11	P48066	632 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	PMS1	P54277	932 aa	Known RBP	11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	MCCD1	P59942	119 aa	Predicted RBP	11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	BST2	Q10589	180 aa	Known RBP	11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	STIL	Q15468	1287 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	CSRP2	Q16527	193 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	AASDH	Q4L235	1098 aa	Predicted RBP	11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	C10orf76	Q5T2E6	689 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	FOXR2	Q6PJQ5	311 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	GPRIN1	Q7Z2K8	1008 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	PIGZ	Q86VD9	579 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	CREBRF	Q8IUR6	639 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	PPM1K	Q8N3J5	372 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	TRIML1	Q8N9V2	468 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	SLC4A11	Q8NBS3	891 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	NETO1	Q8TDF5	533 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	SLC35C1	Q96A29	364 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	ZFR	Q96KR1	1074 aa	Known RBP	11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	ARID3A	Q99856	593 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	RTKN	Q9BST9	563 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	KLF16	Q9BXK1	252 aa	Predicted RBP	11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	OLA1	Q9NTK5	396 aa	Known RBP	11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	DNAJC17	Q9NVM6	304 aa	Known RBP	11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	TSPAN16	Q9UKR8	245 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	PCDHB4	Q9Y5E5	795 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	PCDHGA5	Q9Y5G8	931 aa		11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.52	□□□□□ -0.57
NPIPB4-222	ENST00000614197		K7EQS6	105 aa		11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	XPO1	O14980	1071 aa	Known RBP	11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	MAP3K13	O43283	966 aa		11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	TULP3	O75386	442 aa		11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	ZBED1	O96006	694 aa		11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	PAEP	P09466	180 aa		11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	SETSIP	P0DME0	302 aa		11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	TKTL1	P51854	596 aa		11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	YWHAG	P61981	247 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	UBE2H	P62256	183 aa		11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	EFEMP1	Q12805	493 aa		11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	CRY1	Q16526	586 aa		11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	TPD52L1	Q16890	204 aa	Predicted RBP	11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	IL31	Q6EBC2	164 aa		11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	ANO7	Q6IWH7	933 aa		11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	TMEM270	Q6UE05	265 aa		11.51	□□□□□ -0.57
NPIPB4-222	ENST00000614197	PRR23C	Q6ZRP0	262 aa		11.51	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms