RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 MON1AQ86VX9 555 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 ARFGAP1Q8N6T3 406 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 SLC7A14Q8TBB6 771 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 ALG3Q92685 438 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 CAPZA3Q96KX2 299 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 CEP295NLQ96MC4 621 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 TBCBQ99426 244 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 TRIM62Q9BVG3 475 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 RAB6CQ9H0N0 254 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 GMIPQ9P107 970 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 PCSK1NQ9UHG2 260 aa18.34■□□□□ 0.53
SREK1-216ENST00000612404 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.34■□□□□ 0.53
SREK1-216ENST00000612404 ZNF638Q14966 1978 aaKnown RBP18.33■□□□□ 0.53
SREK1-216ENST00000612404 SYNJ2BP-COX16A0A087WUM0 186 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 ZNF185O15231 689 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 CTNNA2P26232 953 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 PGFP49763 221 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 ZFYVE27Q5T4F4 411 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 PDE12Q6L8Q7 609 aaKnown RBP18.33■□□□□ 0.52
SREK1-216ENST00000612404 LILRA6Q6PI73 481 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 SCD5Q86SK9 330 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 KREMEN2Q8NCW0 462 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 GDPD5Q8WTR4 605 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 COG1Q8WTW3 980 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 NMUR1Q9HB89 426 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 ABCC13Q9NSE7 274 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 COMMD8Q9NX08 183 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 COX16Q9P0S2 106 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 FBXW11Q9UKB1 542 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 GREB1Q4ZG55 1949 aa18.33■□□□□ 0.52
SREK1-216ENST00000612404 PSTPIP1O43586 416 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 CSH1P0DML2 217 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 CSH2P0DML3 217 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 PRLRP16471 622 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 MIPP30301 263 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 CLCN4P51793 760 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 EPHB3P54753 998 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 PITX1P78337 314 aaPredicted RBP18.32■□□□□ 0.52
SREK1-216ENST00000612404 HADHQ16836 314 aaKnown RBP18.32■□□□□ 0.52
SREK1-216ENST00000612404 SCYL2Q6P3W7 929 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 ARHGAP18Q8N392 663 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 ADAM32Q8TC27 787 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 UBE2Q2Q8WVN8 375 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 TIFAQ96CG3 184 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 SLITRK1Q96PX8 696 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 ZWILCHQ9H900 591 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 CDC23Q9UJX2 597 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 MRFAP1Q9Y605 127 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 PLXNA3P51805 1871 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 MYO9BQ13459 2157 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 FAM92AA1XBS5 289 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 M0QYT0 321 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 PEX5P50542 639 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 RWDD2BP57060 319 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 CCDC149Q6ZUS6 474 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 NPY6RQ99463 290 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 ADAM33Q9BZ11 813 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 EHD2Q9NZN4 543 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 USP18Q9UMW8 372 aa18.32■□□□□ 0.52
SREK1-216ENST00000612404 PER2O15055 1255 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 PRPSAP2O60256 369 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 LRG1P02750 347 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 C8AP07357 584 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 PCK1P35558 622 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 NME3Q13232 169 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 PLD1Q13393 1074 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 ZNF211Q13398 564 aaPredicted RBP18.31■□□□□ 0.52
SREK1-216ENST00000612404 SMTNL2Q2TAL5 461 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 DCAF12L1Q5VU92 463 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 RBM23Q86U06 439 aaKnown RBP18.31■□□□□ 0.52
SREK1-216ENST00000612404 TTLL2Q9BWV7 592 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 FAM204AQ9H8W3 233 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 TLR8Q9NR97 1041 aaKnown RBP18.31■□□□□ 0.52
SREK1-216ENST00000612404 EPOPA6NHQ4 379 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 CEP104O60308 925 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 IL1R2P27930 398 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 ATXN1P54253 815 aaKnown RBP18.31■□□□□ 0.52
SREK1-216ENST00000612404 HDAC4P56524 1084 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 SLC25A11Q02978 314 aaKnown RBP18.31■□□□□ 0.52
SREK1-216ENST00000612404 TUBB2AQ13885 445 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 KCNT1Q5JUK3 1230 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 TXNRD3NBQ6F5E7 133 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 RSRC2Q7L4I2 434 aaKnown RBP18.31■□□□□ 0.52
SREK1-216ENST00000612404 RNF139Q8WU17 664 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 CENPIQ92674 756 aaPredicted RBP18.31■□□□□ 0.52
SREK1-216ENST00000612404 NT5C3BQ969T7 300 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 PBKQ96KB5 322 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 ZNF512Q96ME7 567 aaPredicted RBP18.31■□□□□ 0.52
SREK1-216ENST00000612404 TUBB2BQ9BVA1 445 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 KLHL11Q9NVR0 708 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 OSER1Q9NX31 292 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 RRN3Q9NYV6 651 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 CALCOCO1Q9P1Z2 691 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 NUDT5Q9UKK9 219 aa18.31■□□□□ 0.52
SREK1-216ENST00000612404 CLASP2O75122 1294 aaKnown RBP18.3■□□□□ 0.52
SREK1-216ENST00000612404 HMGA1P17096 107 aaKnown RBP18.3■□□□□ 0.52
SREK1-216ENST00000612404 DEUP1Q05D60 604 aa18.3■□□□□ 0.52
SREK1-216ENST00000612404 ATP13A4Q4VNC1 1196 aa18.3■□□□□ 0.52
SREK1-216ENST00000612404 ODF2Q5BJF6 829 aa18.3■□□□□ 0.52
SREK1-216ENST00000612404 CCDC181Q5TID7 509 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms