RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 TULP3O75386 442 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 PRPF40AO75400 957 aaKnown RBP7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 DXOO77932 396 aaKnown RBP7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 ADH5P11766 374 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 ODC1P11926 461 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 AFF3P51826 1226 aaKnown RBP7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 IL9RQ01113 521 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 NR5A1Q13285 461 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 KCNB1Q14721 858 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 DDR2Q16832 855 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 C10orf76Q5T2E6 689 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 MPZL3Q6UWV2 235 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 KIAA1324Q6UXG2 1013 aaKnown RBP7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 SLFN12Q8IYM2 578 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 NAT16Q8N8M0 369 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 TERB1Q8NA31 727 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 LIN37Q96GY3 246 aaPredicted RBP7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 CNDP2Q96KP4 475 aaKnown RBP7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 MRPL4Q9BYD3 311 aaKnown RBP7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 DPH1Q9BZG8 443 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 PLEKHA5Q9HAU0 1116 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 OSGEPQ9NPF4 335 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 GJB4Q9NTQ9 266 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 UBQLN1Q9UMX0 589 aaKnown RBP7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 NOL7Q9UMY1 257 aaKnown RBP7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 PCDHA12Q9UN75 941 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 CLCA2Q9UQC9 943 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 PCDHB5Q9Y5E4 795 aa7.69□□□□□ -1.18
PTCHD3P1-201ENST00000612350 SPTBN1Q01082 2364 aaKnown RBP7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 A0A1B0GTQ1 180 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 PIRO00625 290 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 SLC9A3R1O14745 358 aaPredicted RBP7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 CCNT1O60563 726 aaKnown RBP7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 BAG4O95429 457 aaKnown RBP7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 ADH1CP00326 375 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 IGLV3-19P01714 112 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 CXCL8P10145 99 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 PFKLP17858 780 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 CTSKP43235 329 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 GRIA4P48058 902 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 TPMTP51580 245 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 SLC7A9P82251 487 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 INSM1Q01101 510 aaPredicted RBP7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 TLE1Q04724 770 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 GAD2Q05329 585 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 ILKQ13418 452 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 INAVAQ3KP66 663 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 RILPL1Q5EBL4 403 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 LY6G5CQ5SRR4 150 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 SDE2Q6IQ49 451 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 XKR5Q6UX68 686 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 BRAPQ7Z569 592 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 CATSPER3Q86XQ3 398 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 GATAD2AQ86YP4 633 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 CHPFQ8IZ52 775 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 MTMR9Q96QG7 549 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 TCHPQ9BT92 498 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 RNF38Q9H0F5 515 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 ZSCAN16Q9H4T2 348 aaPredicted RBP7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 DEC1Q9P2X7 70 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 PCDHB1Q9Y5F3 818 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 NBASA2RRP1 2371 aa7.68□□□□□ -1.18
PTCHD3P1-201ENST00000612350 TLN1Q9Y490 2541 aaKnown RBP7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 BLACEA4D250 179 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 WASH3PC4AMC7 463 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 LAD1O00515 517 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 HOXC11O43248 304 aaPredicted RBP7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 STX6O43752 255 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 MED24O75448 989 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 OLFM2O95897 454 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 MPOP05164 745 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 HARSP12081 509 aaKnown RBP7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 SYT1P21579 422 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 PAX3P23760 479 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 CYP2F1P24903 491 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 OXTRP30559 389 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 ERVPABLB-1P60509 514 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 RPL10AP62906 217 aaKnown RBP7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 SKOR1P84550 965 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 GUCY1B3Q02153 619 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 SHBQ15464 509 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 TEAD4Q15561 434 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 KMT5BQ4FZB7 885 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 EARS2Q5JPH6 523 aaKnown RBP7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 SPATA1Q5VX52 437 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 MCTP1Q6DN14 999 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 LAYNQ6UX15 382 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 DCP1BQ8IZD4 617 aaKnown RBP7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 LSMEM2Q8N112 164 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 THEM5Q8N1Q8 247 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 FSIP1Q8NA03 581 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 IFT74Q96LB3 600 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 SEMA3CQ99985 751 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 MKRN2Q9H000 416 aaKnown RBP7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 TM9SF3Q9HD45 589 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 ASCL3Q9NQ33 180 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 ARHGAP28Q9P2N2 729 aa7.67□□□□□ -1.18
PTCHD3P1-201ENST00000612350 DSEQ9UL01 958 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms