RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 ALDH9A1P49189 494 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 PTPRHQ9HD43 1115 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 HBP1O60381 514 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 RSBN1Q5VWQ0 802 aaPredicted RBP13.46□□□□□ -0.25
USP6NL-205ENST00000609104 TMEM26Q6ZUK4 368 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 LRRC40Q9H9A6 602 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 CSHL1Q14406 222 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 SNX30Q5VWJ9 437 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 CARNMT1Q8N4J0 409 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 CNTNAP5Q8WYK1 1306 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 F5H5T6 163 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 SNPHO15079 494 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 LRG1P02750 347 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 RPRD1AQ96P16 312 aaPredicted RBP13.46□□□□□ -0.25
USP6NL-205ENST00000609104 UBP1Q9NZI7 540 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 CHRNA5P30532 468 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 NEDD8Q15843 81 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 CAMKK2Q96RR4 588 aa13.46□□□□□ -0.25
USP6NL-205ENST00000609104 FRMD8P1Q9BZ68 369 aaPredicted RBP13.46□□□□□ -0.25
USP6NL-205ENST00000609104 NAIF1Q69YI7 327 aaPredicted RBP13.46□□□□□ -0.26
USP6NL-205ENST00000609104 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.46□□□□□ -0.26
USP6NL-205ENST00000609104 CPB2Q96IY4 423 aa13.46□□□□□ -0.26
USP6NL-205ENST00000609104 KLHL3Q9UH77 587 aa13.46□□□□□ -0.26
USP6NL-205ENST00000609104 FASP25445 335 aa13.46□□□□□ -0.26
USP6NL-205ENST00000609104 NACC2Q96BF6 587 aa13.46□□□□□ -0.26
USP6NL-205ENST00000609104 POP1Q99575 1024 aaKnown RBP13.46□□□□□ -0.26
USP6NL-205ENST00000609104 DYRK1BQ9Y463 629 aa13.46□□□□□ -0.26
USP6NL-205ENST00000609104 ERI2A8K979 691 aaKnown RBP13.46□□□□□ -0.26
USP6NL-205ENST00000609104 TAF6P49848 677 aa13.46□□□□□ -0.26
USP6NL-205ENST00000609104 BOLA3Q53S33 107 aa13.46□□□□□ -0.26
USP6NL-205ENST00000609104 SYTL1Q8IYJ3 562 aa13.46□□□□□ -0.26
USP6NL-205ENST00000609104 FIG4Q92562 907 aa13.46□□□□□ -0.26
USP6NL-205ENST00000609104 PAFAH2Q99487 392 aa13.46□□□□□ -0.26
USP6NL-205ENST00000609104 KDM6AO15550 1401 aaPredicted RBP13.45□□□□□ -0.26
USP6NL-205ENST00000609104 SMIM31A0A1B0GVY4 71 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 CENPXA8MT69 81 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 FKBP6O75344 327 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 KATNA1O75449 491 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 BAIAP3O94812 1187 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 MT-CO1P00395 513 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 ZSWIM7Q19AV6 140 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 C16orf62Q7Z3J2 963 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 MIEF1Q9NQG6 463 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 POLE3Q9NRF9 147 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 SAC3D1A6NKF1 404 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 ASNA1O43681 348 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 FAM228AQ86W67 206 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 CLPBQ9H078 707 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 CNOT7Q9UIV1 285 aaKnown RBP13.45□□□□□ -0.26
USP6NL-205ENST00000609104 TM9SF1O15321 606 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 STAU1O95793 577 aaKnown RBP13.45□□□□□ -0.26
USP6NL-205ENST00000609104 MUTP22033 750 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 TET3O43151 1660 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 ATG7O95352 703 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 ALOX12P18054 663 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 ZNF618Q5T7W0 954 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 ZNF57Q68EA5 555 aaPredicted RBP13.45□□□□□ -0.26
USP6NL-205ENST00000609104 KCNH7Q9NS40 1196 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 ZMYND8Q9ULU4 1186 aaPredicted RBP13.45□□□□□ -0.26
USP6NL-205ENST00000609104 CYP2C9P11712 490 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 ACOX2Q99424 681 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 OLFM1Q99784 485 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 MKNK1Q9BUB5 465 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 MAPK1P28482 360 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 YWHAZP63104 245 aaKnown RBP13.45□□□□□ -0.26
USP6NL-205ENST00000609104 NR6A1Q15406 480 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 CDC42EP5Q6NZY7 148 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 PTAR1Q7Z6K3 402 aaPredicted RBP13.45□□□□□ -0.26
USP6NL-205ENST00000609104 SH3BP4Q9P0V3 963 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 CTDNEP1O95476 244 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 RARGP13631 454 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 CNTFP26441 200 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 CACNA2D1P54289 1103 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 STX4Q12846 297 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 NECAB2Q7Z6G3 386 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 FANCEQ9HB96 536 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 OSGEPQ9NPF4 335 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 INPP4BO15327 924 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 NR3C2P08235 984 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 CPA3P15088 417 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 SBK1Q52WX2 424 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 MACC1Q6ZN28 852 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 NYAP1Q6ZVC0 841 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 ADGRL3Q9HAR2 1447 aa13.45□□□□□ -0.26
USP6NL-205ENST00000609104 TPP2P29144 1249 aaPredicted RBP13.44□□□□□ -0.26
USP6NL-205ENST00000609104 CYP4Z2PQ8N1L4 340 aa13.44□□□□□ -0.26
USP6NL-205ENST00000609104 FUT8Q9BYC5 575 aa13.44□□□□□ -0.26
USP6NL-205ENST00000609104 JMJD4Q9H9V9 463 aa13.44□□□□□ -0.26
USP6NL-205ENST00000609104 DDX20Q9UHI6 824 aaKnown RBP13.44□□□□□ -0.26
USP6NL-205ENST00000609104 MKL2Q9ULH7 1088 aa13.44□□□□□ -0.26
USP6NL-205ENST00000609104 MFN2O95140 757 aa13.44□□□□□ -0.26
USP6NL-205ENST00000609104 CYP2B6P20813 491 aa13.44□□□□□ -0.26
USP6NL-205ENST00000609104 ARHGAP15Q53QZ3 475 aa13.44□□□□□ -0.26
USP6NL-205ENST00000609104 SPIRE2Q8WWL2 714 aa13.44□□□□□ -0.26
USP6NL-205ENST00000609104 LRRC7Q96NW7 1537 aa13.44□□□□□ -0.26
USP6NL-205ENST00000609104 PTGES3LE9PB15 166 aa13.44□□□□□ -0.26
USP6NL-205ENST00000609104 RIPOR1Q6ZS17 1223 aa13.44□□□□□ -0.26
USP6NL-205ENST00000609104 SLC37A4O43826 429 aa13.44□□□□□ -0.26
USP6NL-205ENST00000609104 TCF7P36402 384 aaPredicted RBP13.44□□□□□ -0.26
USP6NL-205ENST00000609104 IL12RB1P42701 662 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms