RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 ZNF132P52740 706 aa15.88■□□□□ 0.13
SSBP4-214ENST00000607020 SF3A1Q15459 793 aaKnown RBP15.88■□□□□ 0.13
SSBP4-214ENST00000607020 BRAPQ7Z569 592 aa15.88■□□□□ 0.13
SSBP4-214ENST00000607020 GLIS3Q8NEA6 775 aa15.88■□□□□ 0.13
SSBP4-214ENST00000607020 BAHD1Q8TBE0 780 aaPredicted RBP15.88■□□□□ 0.13
SSBP4-214ENST00000607020 WBP2Q969T9 261 aa15.88■□□□□ 0.13
SSBP4-214ENST00000607020 CCSER2Q9H7U1 834 aa15.88■□□□□ 0.13
SSBP4-214ENST00000607020 DNAJC17Q9NVM6 304 aaKnown RBP15.88■□□□□ 0.13
SSBP4-214ENST00000607020 WSB2Q9NYS7 404 aaPredicted RBP15.88■□□□□ 0.13
SSBP4-214ENST00000607020 PCDHGB2Q9Y5G2 931 aa15.88■□□□□ 0.13
SSBP4-214ENST00000607020 TNRC6BQ9UPQ9 1833 aaKnown RBP15.88■□□□□ 0.13
SSBP4-214ENST00000607020 SMG1Q96Q15 3661 aaKnown RBP15.88■□□□□ 0.13
SSBP4-214ENST00000607020 HELZ2Q9BYK8 2649 aaKnown RBP15.88■□□□□ 0.13
SSBP4-214ENST00000607020 ANAPC1Q9H1A4 1944 aa15.88■□□□□ 0.13
SSBP4-214ENST00000607020 PLXND1Q9Y4D7 1925 aa15.88■□□□□ 0.13
SSBP4-214ENST00000607020 A0A087WV48 116 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 PRPF6O94906 941 aaKnown RBP15.87■□□□□ 0.13
SSBP4-214ENST00000607020 CISD3P0C7P0 127 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 MAOBP27338 520 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 GJB2P29033 226 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 RRAGBQ5VZM2 374 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 IL27RAQ6UWB1 636 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 CBWD2Q8IUF1 395 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 SCUBE3Q8IX30 993 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 B3GALNT2Q8NCR0 500 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 SCAMP5Q8TAC9 235 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 SCFD1Q8WVM8 642 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 KCNK16Q96T55 309 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 CDC6Q99741 560 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 FGFBP2Q9BYJ0 223 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 DPEP3Q9H4B8 488 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 ITM2CQ9NQX7 267 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 TOR4AQ9NXH8 423 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 USP36Q9P275 1121 aaKnown RBP15.87■□□□□ 0.13
SSBP4-214ENST00000607020 FBXO10Q9UK96 956 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 ADAMTS20P59510 1910 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 ASXL3Q9C0F0 2248 aa15.87■□□□□ 0.13
SSBP4-214ENST00000607020 CLDN5O00501 218 aa15.86■□□□□ 0.13
SSBP4-214ENST00000607020 NPC1O15118 1278 aa15.86■□□□□ 0.13
SSBP4-214ENST00000607020 TYRP14679 529 aa15.86■□□□□ 0.13
SSBP4-214ENST00000607020 SLC5A3P53794 718 aa15.86■□□□□ 0.13
SSBP4-214ENST00000607020 WDR72Q3MJ13 1102 aa15.86■□□□□ 0.13
SSBP4-214ENST00000607020 PAQR9Q6ZVX9 377 aa15.86■□□□□ 0.13
SSBP4-214ENST00000607020 NOC3LQ8WTT2 800 aaKnown RBP15.86■□□□□ 0.13
SSBP4-214ENST00000607020 LRIG1Q96JA1 1093 aa15.86■□□□□ 0.13
SSBP4-214ENST00000607020 KLF16Q9BXK1 252 aaPredicted RBP15.86■□□□□ 0.13
SSBP4-214ENST00000607020 CD93Q9NPY3 652 aa15.86■□□□□ 0.13
SSBP4-214ENST00000607020 PANK4Q9NVE7 773 aa15.86■□□□□ 0.13
SSBP4-214ENST00000607020 METTL12A8MUP2 240 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 A8MXQ7 604 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 CER1O95813 267 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 IGLV3-19P01714 112 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 IDEP14735 1019 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 TNNC1P63316 161 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 IFRD2Q12894 506 aaPredicted RBP15.85■□□□□ 0.13
SSBP4-214ENST00000607020 CAMK2BQ13554 666 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 ENPP2Q13822 863 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 GALNT15Q8N3T1 639 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 C1orf216Q8TAB5 229 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 TOE1Q96GM8 510 aaKnown RBP15.85■□□□□ 0.13
SSBP4-214ENST00000607020 BBS2Q9BXC9 721 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 SLC6A17Q9H1V8 727 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 GAREM1Q9H706 876 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 DMAP1Q9NPF5 467 aaPredicted RBP15.85■□□□□ 0.13
SSBP4-214ENST00000607020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.85■□□□□ 0.135e-8■■■■■ 144.6
SSBP4-214ENST00000607020 TM7SF3Q9NS93 570 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 HSPBP1Q9NZL4 362 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 GMIPQ9P107 970 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 SRPRBQ9Y5M8 271 aaKnown RBP15.85■□□□□ 0.13
SSBP4-214ENST00000607020 RAD54BQ9Y620 910 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 ATP8B3O60423 1300 aa15.85■□□□□ 0.13
SSBP4-214ENST00000607020 URB1O60287 2271 aaKnown RBP15.84■□□□□ 0.13
SSBP4-214ENST00000607020 EIF4E1BA6NMX2 242 aaKnown RBP15.84■□□□□ 0.13
SSBP4-214ENST00000607020 NEDD8-MDP1E9PL57 170 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 BCAT2O15382 392 aaPredicted RBP15.84■□□□□ 0.13
SSBP4-214ENST00000607020 FLRT2O43155 660 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 TLR5O60602 858 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 CILPO75339 1184 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 NCAM1P13591 858 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 OXTRP30559 389 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 ATICP31939 592 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 MATKP42679 507 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 DGKGP49619 791 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 BNC1Q01954 994 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 CUL4AQ13619 759 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 PSMD6Q15008 389 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 LARP1BQ659C4 914 aaKnown RBP15.84■□□□□ 0.13
SSBP4-214ENST00000607020 KIAA1324Q6UXG2 1013 aaKnown RBP15.84■□□□□ 0.13
SSBP4-214ENST00000607020 STXBP4Q6ZWJ1 553 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 FAM35AQ86V20 835 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 SETD7Q8WTS6 366 aaKnown RBP15.84■□□□□ 0.13
SSBP4-214ENST00000607020 SNX21Q969T3 373 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 XYLT2Q9H1B5 865 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 PCED1AQ9H1Q7 454 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 VRTNQ9H8Y1 702 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 IL21RQ9HBE5 538 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 FBXO2Q9UK22 296 aaPredicted RBP15.84■□□□□ 0.13
SSBP4-214ENST00000607020 SLC27A6Q9Y2P4 619 aa15.84■□□□□ 0.13
SSBP4-214ENST00000607020 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.84■□□□□ 0.13
SSBP4-214ENST00000607020 STON1Q9Y6Q2 735 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms