RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 ATL2Q8NHH9 583 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 RAPGEF5Q92565 580 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 NKD2Q969F2 451 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CAVIN3Q969G5 261 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PEBP4Q96S96 227 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TMEM209Q96SK2 561 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 KCNK16Q96T55 309 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ERP44Q9BS26 406 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 MCOLN1Q9GZU1 580 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 NGRNQ9NPE2 291 aaKnown RBP12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PRDM5Q9NQX1 630 aaPredicted RBP12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ABCC13Q9NSE7 274 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 AMACRQ9UHK6 382 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SCML2Q9UQR0 700 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 NR2E1Q9Y466 385 aa12.82□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 DOCK4Q8N1I0 1966 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 APOC4-APOC2K7ER74 178 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PIK3R2O00459 728 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 GRAP2O75791 330 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 APOC2P02655 101 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 HTR7P34969 479 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 GRIK1P39086 918 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PTGIRP43119 386 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SULT1E1P49888 294 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SLC5A3P53794 718 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CACNA2D1P54289 1103 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 RPL10AP62906 217 aaKnown RBP12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 DSG1Q02413 1049 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 FPGSQ05932 587 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 MTA1Q13330 715 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 RTP2Q5QGT7 225 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ACBD5Q5T8D3 534 aaPredicted RBP12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TPGS2Q68CL5 300 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 DUPD1Q68J44 220 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TXNRD3NBQ6F5E7 133 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 GPRIN1Q7Z2K8 1008 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 DDX53Q86TM3 631 aaKnown RBP12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 JAMLQ86YT9 394 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 NUP93Q8N1F7 819 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ZNF276Q8N554 614 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PHOSPHO2Q8TCD6 241 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 AENQ8WTP8 325 aaKnown RBP12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 RNF25Q96BH1 459 aaPredicted RBP12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TMEM169Q96HH4 297 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SNRNP25Q9BV90 132 aaKnown RBP12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ZWILCHQ9H900 591 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 VIPAS39Q9H9C1 493 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.81□□□□□ -0.361e-6■■■□□ 15.3
NEDD8-MDP1-203ENST00000604306 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SPG21Q9NZD8 308 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SSX2IPQ9Y2D8 614 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ANAPC1Q9H1A4 1944 aa12.81□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TCRBV7S2A1N4TA0A589 114 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 MTMR11A4FU01 709 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 YJEFN3A6XGL0 299 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 E7ENQ6 273 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CAPN9O14815 690 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 UPP2O95045 317 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 IGLV3-25P01717 112 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 FYNP06241 537 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ITGAVP06756 1048 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 HAPLN1P10915 354 aaPredicted RBP12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CPB1P15086 417 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TGM2P21980 687 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 GJC1P36383 396 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 GLUD2P49448 558 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 NDUFV1P49821 464 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CDH6P55285 790 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 DEFB103AP81534 67 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ATP11AP98196 1134 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 GUCY2DQ02846 1103 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PTK6Q13882 451 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 DPYSL3Q14195 570 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 BTG3Q14201 252 aaPredicted RBP12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PSMD5Q16401 504 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CDO1Q16878 200 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ATP13A4Q4VNC1 1196 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 DCAF6Q58WW2 860 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SPDYCQ5MJ68 293 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 OTUD1Q5VV17 481 aaPredicted RBP12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 MSANTD2Q6P1R3 559 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 MON1AQ86VX9 555 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 CCDC105Q8IYK2 499 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 MREGQ8N565 214 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 COLGALT1Q8NBJ5 622 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 BBOF1Q8ND07 529 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 SLC35B2Q8TB61 432 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 HDAC7Q8WUI4 952 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 BCL7CQ8WUZ0 217 aaPredicted RBP12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 OVCA2Q8WZ82 227 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 EPC1Q9H2F5 836 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PCDH18Q9HCL0 1135 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 EPB41L5Q9HCM4 733 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 ABI2Q9NYB9 513 aaPredicted RBP12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 PCSK1NQ9UHG2 260 aa12.8□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 M0QYT0 321 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 TTI1O43156 1089 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 LIASO43766 372 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 GJB5O95377 273 aa12.79□□□□□ -0.36
NEDD8-MDP1-203ENST00000604306 FGBP02675 491 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms