RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 PCDHB12Q9Y5F1 795 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 PCDHA3Q9Y5H8 950 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 CHD7Q9P2D1 2997 aa18.14■□□□□ 0.49
PPFIA3-207ENST00000602716 DPYSL4O14531 572 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 CTNNB1P35222 781 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 PPM1AP35813 382 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 SLC1A1P43005 524 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 SLC25A11Q02978 314 aaKnown RBP18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 DUSP4Q13115 394 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 RNPC3Q96LT9 517 aaKnown RBP18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 HERPUD2Q9BSE4 406 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 PLXNA4Q9HCM2 1894 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 MIF4GDA9UHW6 222 aaKnown RBP18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 GOLGA8KD6RF30 607 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 CEP104O60308 925 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 DAB1O75553 588 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 ZBED1O96006 694 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 URODP06132 367 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 GLI1P08151 1106 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 PYGMP11217 842 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 SCNN1AP37088 669 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 PIGHQ14442 188 aaPredicted RBP18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 SMTNL2Q2TAL5 461 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 MGAT5BQ3V5L5 792 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 SYPL2Q5VXT5 272 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 CYP4V2Q6ZWL3 525 aaPredicted RBP18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 IFT20Q8IY31 132 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 DEFB106AQ8N104 65 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 ALG13Q9NP73 1137 aaKnown RBP18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 CNGB3Q9NQW8 809 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 FEZ2Q9UHY8 353 aaPredicted RBP18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 USP3Q9Y6I4 520 aa18.13■□□□□ 0.49
PPFIA3-207ENST00000602716 CHD9Q3L8U1 2897 aa18.12■□□□□ 0.49
PPFIA3-207ENST00000602716 MYO1CO00159 1063 aa18.12■□□□□ 0.49
PPFIA3-207ENST00000602716 OPA1O60313 960 aa18.12■□□□□ 0.49
PPFIA3-207ENST00000602716 SEC24AO95486 1093 aa18.12■□□□□ 0.49
PPFIA3-207ENST00000602716 ATF6P18850 670 aa18.12■□□□□ 0.49
PPFIA3-207ENST00000602716 MAGEA11P43364 429 aa18.12■□□□□ 0.49
PPFIA3-207ENST00000602716 MTMR3Q13615 1198 aa18.12■□□□□ 0.49
PPFIA3-207ENST00000602716 CNPY3Q9BT09 278 aa18.12■□□□□ 0.49
PPFIA3-207ENST00000602716 C11orf84Q9BUA3 381 aaPredicted RBP18.12■□□□□ 0.49
PPFIA3-207ENST00000602716 PNPLA8Q9NP80 782 aa18.12■□□□□ 0.49
PPFIA3-207ENST00000602716 AAASQ9NRG9 546 aa18.12■□□□□ 0.49
PPFIA3-207ENST00000602716 PCSK1NQ9UHG2 260 aa18.12■□□□□ 0.49
PPFIA3-207ENST00000602716 COL4A4P53420 1690 aaPredicted RBP18.12■□□□□ 0.49
PPFIA3-207ENST00000602716 HSF2BPO75031 334 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 HAPLN1P10915 354 aaPredicted RBP18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 DNAJB1P25685 340 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 MIPP30301 263 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 SNX16P57768 344 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 KCNT1Q5JUK3 1230 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 VSTM1Q6UX27 236 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 UBL4BQ8N7F7 174 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 SPPL2BQ8TCT7 592 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 FAM172AQ8WUF8 416 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 EDEM1Q92611 657 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 C8orf48Q96LL4 319 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 SLC2A13Q96QE2 648 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 TBCBQ99426 244 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 MTIF3Q9H2K0 278 aaKnown RBP18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 ZWILCHQ9H900 591 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 NGRNQ9NPE2 291 aaKnown RBP18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 NAALADL1Q9UQQ1 740 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 PI4K2BG5E9Z4 385 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 CES2O00748 559 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 TEX28O15482 410 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 LILRB3O75022 631 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 FBXO21O94952 628 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 SDC4P31431 198 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 HDAC4P56524 1084 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 KCTD19Q17RG1 926 aaPredicted RBP18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 PM20D1Q6GTS8 502 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 DDX23Q9BUQ8 820 aaKnown RBP18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 CARD9Q9H257 536 aa18.11■□□□□ 0.49
PPFIA3-207ENST00000602716 TCRBV7S2A1N4TA0A589 114 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 PSTPIP1O43586 416 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 HEXIM1O94992 359 aaKnown RBP18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 LTFP02788 710 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 CA3P07451 260 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 CA8P35219 290 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 BMPR1AP36894 532 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 PBX2P40425 430 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 CARSP49589 748 aaKnown RBP18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 YWHAZP63104 245 aaKnown RBP18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 DCAF6Q58WW2 860 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 EFHC1Q5JVL4 640 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 ADAT2Q7Z6V5 191 aaKnown RBP18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 RHOT1Q8IXI2 618 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 RASGEF1CQ8N431 466 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 ADAM32Q8TC27 787 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 GIPC2Q8TF65 315 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 PBKQ96KB5 322 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 GPATCH2LQ9NWQ4 482 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 YBX2Q9Y2T7 364 aaKnown RBP18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 NR2E1Q9Y466 385 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 TRIM66O15016 1216 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 CAPN15O75808 1086 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 CTSAP10619 480 aa18.1■□□□□ 0.49
PPFIA3-207ENST00000602716 MATKP42679 507 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms