RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 DUOXA1Q1HG43 343 aa22.38■■□□□ 1.17
PNKP-212ENST00000599454 SGSM1Q2NKQ1 1148 aa22.38■■□□□ 1.17
PNKP-212ENST00000599454 GRAMD4Q6IC98 578 aa22.38■■□□□ 1.17
PNKP-212ENST00000599454 SCARA5Q6ZMJ2 495 aa22.38■■□□□ 1.17
PNKP-212ENST00000599454 CRYBG2Q8N1P7 616 aa22.38■■□□□ 1.17
PNKP-212ENST00000599454 DEFB124Q8NES8 71 aa22.38■■□□□ 1.17
PNKP-212ENST00000599454 ZMIZ2Q8NF64 920 aa22.38■■□□□ 1.17
PNKP-212ENST00000599454 XPO6Q96QU8 1125 aaKnown RBP22.38■■□□□ 1.17
PNKP-212ENST00000599454 SDCBP2Q9H190 292 aa22.38■■□□□ 1.17
PNKP-212ENST00000599454 VNN1O95497 513 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 IRF1P10914 325 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 GABRG2P18507 467 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 ITPKAP23677 461 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 CASP1P29466 404 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 MAPK8P45983 427 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 RPL6Q02878 288 aaKnown RBP22.37■■□□□ 1.17
PNKP-212ENST00000599454 CUL4BQ13620 913 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 SDE2Q6IQ49 451 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 SMOQ99835 787 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 TMEM121BQ9BXQ6 578 aaPredicted RBP22.37■■□□□ 1.17
PNKP-212ENST00000599454 DNAJC17Q9NVM6 304 aaKnown RBP22.37■■□□□ 1.17
PNKP-212ENST00000599454 DMAC2Q9NW81 257 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 MARK1Q9P0L2 795 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 CALCOCO1Q9P1Z2 691 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 WDR35Q9P2L0 1181 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 LSM7Q9UK45 103 aaKnown RBP22.37■■□□□ 1.17
PNKP-212ENST00000599454 ZMIZ1Q9ULJ6 1067 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 SLC6A14Q9UN76 642 aa22.37■■□□□ 1.17
PNKP-212ENST00000599454 CACNG3O60359 315 aa22.36■■□□□ 1.17
PNKP-212ENST00000599454 ZNF217O75362 1048 aa22.36■■□□□ 1.17
PNKP-212ENST00000599454 CCDC130P13994 396 aa22.36■■□□□ 1.17
PNKP-212ENST00000599454 ATP5C1P36542 298 aaKnown RBP22.36■■□□□ 1.17
PNKP-212ENST00000599454 AFMP43652 599 aa22.36■■□□□ 1.17
PNKP-212ENST00000599454 ATXN3P54252 364 aaPredicted RBP22.36■■□□□ 1.17
PNKP-212ENST00000599454 ZACNQ401N2 412 aa22.36■■□□□ 1.17
PNKP-212ENST00000599454 SLC2A14Q8TDB8 520 aa22.36■■□□□ 1.17
PNKP-212ENST00000599454 WBP2Q969T9 261 aa22.36■■□□□ 1.17
PNKP-212ENST00000599454 SCNM1Q9BWG6 230 aa22.36■■□□□ 1.17
PNKP-212ENST00000599454 KLF16Q9BXK1 252 aaPredicted RBP22.36■■□□□ 1.17
PNKP-212ENST00000599454 CYLDQ9NQC7 956 aa22.36■■□□□ 1.17
PNKP-212ENST00000599454 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.36■■□□□ 1.17
PNKP-212ENST00000599454 BEST1O76090 585 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 CFIP05156 583 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 SERPINF2P08697 491 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 FAM200BP0CF97 657 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 NDST1P52848 882 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 MAP3K7CLP57077 242 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 GFPT1Q06210 699 aaPredicted RBP22.35■■□□□ 1.17
PNKP-212ENST00000599454 SEMA3BQ13214 749 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 RESP18Q5W5W9 173 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 PIP4P1Q86T03 277 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 CEP57L1Q8IYX8 460 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 HDDC3Q8N4P3 179 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 TMC2Q8TDI7 906 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 BBS2Q9BXC9 721 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 HCN2Q9UL51 889 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 SCML2Q9UQR0 700 aa22.35■■□□□ 1.17
PNKP-212ENST00000599454 ATXN2Q99700 1313 aaKnown RBP22.34■■□□□ 1.17
PNKP-212ENST00000599454 A0A1W2PQF6 199 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 NEDD8-MDP1E9PL57 170 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 IKBKBO14920 756 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 GREM1O60565 184 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 ASS1P00966 412 aaKnown RBP22.34■■□□□ 1.17
PNKP-212ENST00000599454 ME1P48163 572 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 ZNF33AQ06730 810 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 EGFLAMQ63HQ2 1017 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 ATL3Q6DD88 541 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 KLHDC10Q6PID8 442 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 CHPFQ8IZ52 775 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 GATA6Q92908 595 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 GABRG3Q99928 467 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 CAPN10Q9HC96 672 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 PNPLA8Q9NP80 782 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 EXOC1Q9NV70 894 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 PCDHA7Q9UN72 937 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 NEUROG3Q9Y4Z2 214 aa22.34■■□□□ 1.17
PNKP-212ENST00000599454 IGHV1OR15-9A0A0B4J2B8 117 aa22.33■■□□□ 1.17
PNKP-212ENST00000599454 PDXKO00764 312 aa22.33■■□□□ 1.17
PNKP-212ENST00000599454 TYRP14679 529 aa22.33■■□□□ 1.17
PNKP-212ENST00000599454 SPINK2P20155 84 aa22.33■■□□□ 1.17
PNKP-212ENST00000599454 MIB1Q86YT6 1006 aa22.33■■□□□ 1.17
PNKP-212ENST00000599454 KIAA0895Q8NCT3 520 aa22.33■■□□□ 1.17
PNKP-212ENST00000599454 IPO4Q8TEX9 1081 aaKnown RBP22.33■■□□□ 1.17
PNKP-212ENST00000599454 HNRNPABQ99729 332 aaKnown RBP22.33■■□□□ 1.17
PNKP-212ENST00000599454 BACH2Q9BYV9 841 aa22.33■■□□□ 1.17
PNKP-212ENST00000599454 FAM49BQ9NUQ9 324 aa22.33■■□□□ 1.17
PNKP-212ENST00000599454 PCDHA5Q9Y5H7 936 aa22.33■■□□□ 1.17
PNKP-212ENST00000599454 A0A1W2PQD8 194 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 GFRA2O00451 464 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 TRIM24O15164 1050 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 KLRC4O43908 158 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 OPHN1O60890 802 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 TBX18O95935 607 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 TOP3BO95985 862 aaKnown RBP22.32■■□□□ 1.16
PNKP-212ENST00000599454 NR3C1P04150 777 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 SLFN14P0C7P3 912 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 WASP42768 502 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 ASPAP45381 313 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 PGFP49763 221 aa22.32■■□□□ 1.16
PNKP-212ENST00000599454 DLG4P78352 724 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms