RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 RAB41Q5JT25 222 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 C10orf120Q5SQS8 335 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 EMC10Q5UCC4 262 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 DGLUCYQ7Z3D6 616 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 C12orf40Q86WS4 652 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 TTC30AQ86WT1 665 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 SFTPA1Q8IWL2 248 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 NAT16Q8N8M0 369 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 EHBP1Q8NDI1 1231 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 LMO3Q8TAP4 145 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 ACDQ96AP0 544 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 KIAA1468Q9P260 1216 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 CTNND2Q9UQB3 1225 aa15.86■□□□□ 0.13
LIG1-215ENST00000597901 KIF26AQ9ULI4 1882 aaPredicted RBP15.86■□□□□ 0.13
LIG1-215ENST00000597901 EP300Q09472 2414 aaPredicted RBP15.85■□□□□ 0.13
LIG1-215ENST00000597901 APODP05090 189 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 CD19P15391 556 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 TNFRSF4P43489 277 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 MRPS21P82921 87 aaKnown RBP15.85■□□□□ 0.13
LIG1-215ENST00000597901 PDE4CQ08493 712 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 GOLGA8FQ08AF8 430 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 GOLGA8DPQ0D2H9 430 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 CETN1Q12798 172 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 KCNH2Q12809 1159 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 PAK1Q13153 545 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 ANO4Q32M45 955 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 SGO2Q562F6 1265 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 BTBD8Q5XKL5 378 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 PM20D1Q6GTS8 502 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 TADA2BQ86TJ2 420 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 TRIM59Q8IWR1 403 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 CCDC33Q8N5R6 958 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 TRIML1Q8N9V2 468 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 UBA3Q8TBC4 463 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 GAB3Q8WWW8 586 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 RMDN1Q96DB5 314 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 NT5C1BQ96P26 610 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 HHIPQ96QV1 700 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 PARD6AQ9NPB6 346 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 ARHGEF4Q9NR80 690 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 EBF1Q9UH73 591 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 TSPAN16Q9UKR8 245 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 ZNF638Q14966 1978 aaKnown RBP15.85■□□□□ 0.13
LIG1-215ENST00000597901 FANCMQ8IYD8 2048 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 GPR179Q6PRD1 2367 aa15.85■□□□□ 0.13
LIG1-215ENST00000597901 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.84■□□□□ 0.13
LIG1-215ENST00000597901 RNF225M0QZC1 329 aaPredicted RBP15.84■□□□□ 0.13
LIG1-215ENST00000597901 TULP2O00295 520 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 AXIN1O15169 862 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 HOXC11O43248 304 aaPredicted RBP15.84■□□□□ 0.13
LIG1-215ENST00000597901 RPP40O75818 363 aaKnown RBP15.84■□□□□ 0.13
LIG1-215ENST00000597901 APBB3O95704 486 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 TKTL1P51854 596 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 MARSP56192 900 aaKnown RBP15.84■□□□□ 0.13
LIG1-215ENST00000597901 LMNB2Q03252 620 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 SPEM2Q0P670 501 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 GOLGA7BQ2TAP0 167 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 TMEM270Q6UE05 265 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 CACNA2D4Q7Z3S7 1137 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 ETFBKMTQ8IXQ9 262 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 ARHGAP18Q8N392 663 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 PHTF2Q8N3S3 785 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 FAM160A2Q8N612 972 aaPredicted RBP15.84■□□□□ 0.13
LIG1-215ENST00000597901 DEC1Q9P2X7 70 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 HESX1Q9UBX0 185 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 LSM7Q9UK45 103 aaKnown RBP15.84■□□□□ 0.13
LIG1-215ENST00000597901 USP18Q9UMW8 372 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 PCDHB4Q9Y5E5 795 aa15.84■□□□□ 0.13
LIG1-215ENST00000597901 TBC1D3BA6NDS4 549 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 PRR5-ARHGAP8B1AHC4 643 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 O00370 1275 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 XPO1O14980 1071 aaKnown RBP15.83■□□□□ 0.12
LIG1-215ENST00000597901 TULP3O75386 442 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 FGFR1OPO95684 399 aaKnown RBP15.83■□□□□ 0.12
LIG1-215ENST00000597901 ZBED1O96006 694 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 PAEPP09466 180 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 TIE1P35590 1138 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 YWHAGP61981 247 aaKnown RBP eCLIP15.83■□□□□ 0.12
LIG1-215ENST00000597901 COG7P83436 770 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 ARHGAP8P85298 464 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 CNGA2Q16280 664 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 RRAGAQ7L523 313 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.83■□□□□ 0.12
LIG1-215ENST00000597901 MIB1Q86YT6 1006 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 PPM1KQ8N3J5 372 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 TFAP2BQ92481 460 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 NDRG1Q92597 394 aaKnown RBP15.83■□□□□ 0.12
LIG1-215ENST00000597901 KAT5Q92993 513 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 CDK5RAP1Q96SZ6 601 aaKnown RBP15.83■□□□□ 0.12
LIG1-215ENST00000597901 ULBP1Q9BZM6 244 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 LRRC4Q9HBW1 653 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 WDR35Q9P2L0 1181 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 MMP17Q9ULZ9 603 aa15.83■□□□□ 0.12
LIG1-215ENST00000597901 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.83■□□□□ 0.12
LIG1-215ENST00000597901 OTOGLQ3ZCN5 2332 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 GVINP1Q7Z2Y8 2422 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 TRIM24O15164 1050 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 STC2O76061 302 aa15.82■□□□□ 0.12
LIG1-215ENST00000597901 AFPP02771 609 aaKnown RBP15.82■□□□□ 0.12
LIG1-215ENST00000597901 KLKB1P03952 638 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms