RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 POLNQ7Z5Q5 900 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 CREG2Q8IUH2 290 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 RASGEF1CQ8N431 466 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 GPR152Q8TDT2 470 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 GIPC2Q8TF65 315 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 FAM172AQ8WUF8 416 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 TBCBQ99426 244 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 NCAPGQ9BPX3 1015 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 TRIM62Q9BVG3 475 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 RAB6CQ9H0N0 254 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 NMUR1Q9HB89 426 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 CYP4F11Q9HBI6 524 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 RRN3Q9NYV6 651 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 FBXW11Q9UKB1 542 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 NAALADL1Q9UQQ1 740 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 INSL5Q9Y5Q6 135 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 TRIOBPQ9H2D6 2365 aa15.41■□□□□ 0.06
SHKBP1-211ENST00000595945 RANBP2P49792 3224 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 NOTCH4Q99466 2003 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 ZNF185O15231 689 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 RNF8O76064 485 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 TRUB2O95900 331 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 HMGA1P17096 107 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 YWHAQP27348 245 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 IL1R2P27930 398 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 CXCR5P32302 372 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 IRS1P35568 1242 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 DNA2P51530 1060 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 HDAC4P56524 1084 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 RWDD2BP57060 319 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 PITX1P78337 314 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 MTMR3Q13615 1198 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 TXNRD3NBQ6F5E7 133 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 MON1AQ86VX9 555 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 KATNAL2Q8IYT4 538 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 TDHQ8IZJ6 230 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 ARHGAP18Q8N392 663 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 PGAP3Q96FM1 320 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 MYRFLQ96LU7 910 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 PEBP4Q96S96 227 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 PSMB7Q99436 277 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 LMAN2LQ9H0V9 348 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 ABCC13Q9NSE7 274 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 GMIPQ9P107 970 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 TTC7AQ9ULT0 858 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 STAP1Q9ULZ2 295 aa15.4■□□□□ 0.06
SHKBP1-211ENST00000595945 A0A1W2PQH9 124 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 PDE2AO00408 941 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 IGLV3-25P01717 112 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 CSH1P0DML2 217 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 CSH2P0DML3 217 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 ELF1P32519 619 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 SULT1E1P49888 294 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 CLCN4P51793 760 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 ATP11AP98196 1134 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 IFRD2Q12894 506 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 DCAF6Q58WW2 860 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 ZNF572Q7Z3I7 529 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 OVCA2Q8WZ82 227 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 GOLGA1Q92805 767 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 FBXO32Q969P5 355 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 TRMT2BQ96GJ1 504 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 OSER1Q9NX31 292 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 CALCOCO1Q9P1Z2 691 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 RNF14Q9UBS8 474 aa15.39■□□□□ 0.05
SHKBP1-211ENST00000595945 PRRG1O14668 218 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 RIOK3O14730 519 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 CEP104O60308 925 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 LPXNO60711 386 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 CLASP2O75122 1294 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 PYGMP11217 842 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 DESP17661 470 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 KLRC2P26717 231 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 CA8P35219 290 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 ALDH1A3P47895 512 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 PSEN1P49768 467 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 TWF1Q12792 350 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 TAF10Q12962 218 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 PLD1Q13393 1074 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 EIF4EBP2Q13542 120 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 HADHQ16836 314 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 CDO1Q16878 200 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 ATP13A4Q4VNC1 1196 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 SNX30Q5VWJ9 437 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 BTBD8Q5XKL5 378 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 MSANTD2Q6P1R3 559 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 RTL10Q7L3V2 364 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 ZNF276Q8N554 614 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 KREMEN2Q8NCW0 462 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 EXD1Q8NHP7 514 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 ACTRT1Q8TDG2 376 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 DQX1Q8TE96 717 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 SLC22A17Q8WUG5 538 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 TEKT4Q8WW24 435 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 EDEM1Q92611 657 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 DDX56Q9NY93 547 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 CLIC5Q9NZA1 410 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 EHD2Q9NZN4 543 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 USP18Q9UMW8 372 aa15.38■□□□□ 0.05
SHKBP1-211ENST00000595945 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms