RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 DPP6P42658 865 aa15.6■□□□□ 0.09
PNKP-202ENST00000593706 TUBP50607 506 aa15.6■□□□□ 0.09
PNKP-202ENST00000593706 CDH8P55286 799 aa15.6■□□□□ 0.09
PNKP-202ENST00000593706 STK4Q13043 487 aa15.6■□□□□ 0.09
PNKP-202ENST00000593706 PHTF2Q8N3S3 785 aa15.6■□□□□ 0.09
PNKP-202ENST00000593706 FRMD1Q8N878 549 aa15.6■□□□□ 0.09
PNKP-202ENST00000593706 TERB1Q8NA31 727 aa15.6■□□□□ 0.09
PNKP-202ENST00000593706 ADAM33Q9BZ11 813 aa15.6■□□□□ 0.09
PNKP-202ENST00000593706 GDPD2Q9HCC8 539 aa15.6■□□□□ 0.09
PNKP-202ENST00000593706 SPHK2Q9NRA0 654 aa15.6■□□□□ 0.09
PNKP-202ENST00000593706 MBD1Q9UIS9 605 aaPredicted RBP15.6■□□□□ 0.09
PNKP-202ENST00000593706 HOXC11O43248 304 aaPredicted RBP15.59■□□□□ 0.09
PNKP-202ENST00000593706 AP5Z1O43299 807 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 TULP3O75386 442 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 PRR29P0C7W0 189 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 CHRM1P11229 460 aaPredicted RBP15.59■□□□□ 0.09
PNKP-202ENST00000593706 P4HA1P13674 534 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 CCDC130P13994 396 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 HOXB2P14652 356 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 ENGP17813 658 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 SPINK2P20155 84 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 SYKP43405 635 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 AP3M2P53677 418 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 ATXN3P54252 364 aaPredicted RBP15.59■□□□□ 0.09
PNKP-202ENST00000593706 RPL6Q02878 288 aaKnown RBP15.59■□□□□ 0.09
PNKP-202ENST00000593706 NCOA4Q13772 614 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 KNOP1Q1ED39 458 aaKnown RBP15.59■□□□□ 0.09
PNKP-202ENST00000593706 MAP7D1Q3KQU3 841 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 KMT5BQ4FZB7 885 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 SPDYCQ5MJ68 293 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 ACOT1Q86TX2 421 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 ETFBKMTQ8IXQ9 262 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 GOLGA5Q8TBA6 731 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 KCTD10Q9H3F6 313 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 SLC32A1Q9H598 525 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 VRTNQ9H8Y1 702 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 CKAP5Q14008 2032 aa15.59■□□□□ 0.09
PNKP-202ENST00000593706 ATRXP46100 2492 aa15.58■□□□□ 0.09
PNKP-202ENST00000593706 LAMA5O15230 3695 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 A0A0A0MRY4 1105 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 LRRIQ3A6PVS8 624 aaPredicted RBP15.58■□□□□ 0.08
PNKP-202ENST00000593706 ZBTB24O43167 697 aaPredicted RBP15.58■□□□□ 0.08
PNKP-202ENST00000593706 TLR5O60602 858 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 TRIM21P19474 475 aaKnown RBP15.58■□□□□ 0.08
PNKP-202ENST00000593706 ITPKAP23677 461 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 WASP42768 502 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 GOLGA8FQ08AF8 430 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 GOLGA8DPQ0D2H9 430 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 DPYDQ12882 1025 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 ORC1Q13415 861 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 SNX30Q5VWJ9 437 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 GRAMD4Q6IC98 578 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 KIAA1211LQ6NV74 962 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 KRBA2Q6ZNG9 492 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 FUKQ8N0W3 1084 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 KCNV2Q8TDN2 545 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 ELMO3Q96BJ8 720 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 GTPBP2Q9BX10 602 aaKnown RBP15.58■□□□□ 0.08
PNKP-202ENST00000593706 FBXO44Q9H4M3 255 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 TLR8Q9NR97 1041 aaKnown RBP15.58■□□□□ 0.08
PNKP-202ENST00000593706 TMEM74BQ9NUR3 256 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 EXOC1Q9NV70 894 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 DNAJC17Q9NVM6 304 aaKnown RBP15.58■□□□□ 0.08
PNKP-202ENST00000593706 DMAC2Q9NW81 257 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 COMMD8Q9NX08 183 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 CALCOCO1Q9P1Z2 691 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 BAHCC1Q9P281 2608 aa15.58■□□□□ 0.08
PNKP-202ENST00000593706 ITPR1Q14643 2758 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 NEDD8-MDP1E9PL57 170 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 GABRG2P18507 467 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 NTSR1P30989 418 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 HOXD12P35452 270 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 MAP3K7CLP57077 242 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 SDE2Q6IQ49 451 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 SLC23A3Q6PIS1 610 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 SLC36A4Q6YBV0 504 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 PAQR9Q6ZVX9 377 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 TMEM25Q86YD3 366 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 CHPFQ8IZ52 775 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 HDDC3Q8N4P3 179 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 DEFB119Q8N690 84 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 PLEKHO2Q8TD55 490 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 SLC2A14Q8TDB8 520 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 PARD3BQ8TEW8 1205 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 JAKMIP2Q96AA8 810 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 SCNM1Q9BWG6 230 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 BBS2Q9BXC9 721 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 SDCBP2Q9H190 292 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 FAM49BQ9NUQ9 324 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 LSM7Q9UK45 103 aaKnown RBP15.57■□□□□ 0.08
PNKP-202ENST00000593706 PILRBQ9UKJ0 227 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 RALYQ9UKM9 306 aaKnown RBP15.57■□□□□ 0.08
PNKP-202ENST00000593706 ZMIZ1Q9ULJ6 1067 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 TMEM131Q92545 1883 aa15.57■□□□□ 0.08
PNKP-202ENST00000593706 FAM92AA1XBS5 289 aa15.56■□□□□ 0.08
PNKP-202ENST00000593706 RHOBTB3O94955 611 aa15.56■□□□□ 0.08
PNKP-202ENST00000593706 TOP3BO95985 862 aaKnown RBP15.56■□□□□ 0.08
PNKP-202ENST00000593706 RPN1P04843 607 aaKnown RBP15.56■□□□□ 0.08
PNKP-202ENST00000593706 ZDHHC11BP0C7U3 371 aa15.56■□□□□ 0.08
PNKP-202ENST00000593706 PIK3CAP42336 1068 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms