RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 RBL1P28749 1068 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 ADORA2BP29275 332 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 SCNN1AP37088 669 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 YWHAGP61981 247 aaKnown RBP eCLIP17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 BNIP1Q12981 228 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 PPP6R3Q5H9R7 873 aaPredicted RBP17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 LVRNQ6Q4G3 990 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 SLC26A9Q7LBE3 791 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 IGDCC3Q8IVU1 814 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 ANKRD52Q8NB46 1076 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 MZB1Q8WU39 189 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 UPF1Q92900 1129 aaKnown RBP eCLIP17.24■□□□□ 0.355e-15■■■■■ 62.2
PRKCSH-217ENST00000592741 RMDN2Q96LZ7 410 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 CYLDQ9NQC7 956 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 IKBKGQ9Y6K9 419 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 PDCD11Q14690 1871 aaKnown RBP17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 IQANK1A0A1B0GTG1 560 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 GABBR2O75899 941 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 ECM2O94769 699 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 CCDC130P13994 396 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 AKAP5P24588 427 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 CYP2F1P24903 491 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 PNPLA4P41247 253 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 NCALDP61601 193 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 CCDC15Q0P6D6 951 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 CBLBQ13191 982 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 LPIN3Q9BQK8 851 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 SNX25Q9H3E2 840 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 NRDE2Q9H7Z3 1164 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 PIN4Q9Y237 131 aaKnown RBP17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 TCRBV9S1A1TA0A576 114 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 PIRO00625 290 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 TM9SF1O15321 606 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 EDF1O60869 148 aaKnown RBP17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 PDGFRBP09619 1106 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 ZFXP17010 805 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 GNL1P36915 607 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 ACADSBP45954 432 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 ELF3P78545 371 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 ZNF200P98182 395 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 MFSD10Q14728 455 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 DPYSL2Q16555 572 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 C4orf22Q6V702 233 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 ARCQ7LC44 396 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 CRYBG2Q8N1P7 616 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 FITM2Q8N6M3 262 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 KBTBD7Q8WVZ9 684 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 SPOCK2Q92563 424 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 TSPAN18Q96SJ8 248 aa17.23■□□□□ 0.35
PRKCSH-217ENST00000592741 DCAF8L1A6NGE4 600 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 KPNA7A9QM74 516 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 HCRTO43612 131 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 PIAS1O75925 651 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 MT-ND3P03897 115 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 INHBAP08476 426 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 LCP1P13796 627 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 YWHAZP63104 245 aaKnown RBP17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 MGAT5Q09328 741 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 PTK7Q13308 1070 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 SYCP2LQ5T4T6 812 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 ECHDC2Q86YB7 292 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 CLEC4CQ8WTT0 213 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 PPP1R13LQ8WUF5 828 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 DHX35Q9H5Z1 703 aaKnown RBP17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 RNF19AQ9NV58 838 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 ETNK2Q9NVF9 386 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 GDAP2Q9NXN4 497 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 ZNF236Q9UL36 1845 aa17.22■□□□□ 0.35
PRKCSH-217ENST00000592741 SMIM28A0A1B0GU29 152 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 MGRN1O60291 552 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 FGFR1P11362 822 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 L1CAMP32004 1257 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 MAGEA6P43360 314 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 RPL34P49207 117 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 TAF6P49848 677 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 TBC1D1Q86TI0 1168 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 BANPQ8N9N5 519 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 DNAJB3Q8WWF6 145 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 SLC44A1Q8WWI5 657 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 CENPIQ92674 756 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 CFAP36Q96G28 342 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 C11orf84Q9BUA3 381 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 PNPLA8Q9NP80 782 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 KLK14Q9P0G3 267 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 GJD2Q9UKL4 321 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 AP4E1Q9UPM8 1137 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 GNEQ9Y223 722 aaKnown RBP17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 USH1CQ9Y6N9 552 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 CHUKO15111 745 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 TOMM70O94826 608 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 MAP3K6O95382 1288 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 ALADP13716 330 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 KCNE1P15382 129 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 TFE3P19532 575 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 FKBP1BP68106 108 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 SNX17Q15036 470 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 SETDB1Q15047 1291 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 KBTBD12Q3ZCT8 623 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 SV2CQ496J9 727 aa17.21■□□□□ 0.35
PRKCSH-217ENST00000592741 TLK2Q86UE8 772 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms