RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 PXNP49023 591 aaPredicted RBP15.97■□□□□ 0.15
ERCC1-213ENST00000592023 GCNT1Q02742 428 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 ADIGQ0VDE8 80 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 SRSF5Q13243 272 aaKnown RBP15.97■□□□□ 0.15
ERCC1-213ENST00000592023 LPAL2Q16609 132 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 TPD52L1Q16890 204 aaPredicted RBP15.97■□□□□ 0.15
ERCC1-213ENST00000592023 DPCR1Q3MIW9 517 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 RAB41Q5JT25 222 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 TADA2BQ86TJ2 420 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 MIB1Q86YT6 1006 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 EHBP1Q8NDI1 1231 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 TFAP2BQ92481 460 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 HHIPQ96QV1 700 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 LRRC4Q9HBW1 653 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 CLIC5Q9NZA1 410 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 NCDNQ9UBB6 729 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 DNMT3LQ9UJW3 386 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 ATG2BQ96BY7 2078 aa15.97■□□□□ 0.15
ERCC1-213ENST00000592023 ANTXRLA6NF34 631 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 M0QYV0 167 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 RNF225M0QZC1 329 aaPredicted RBP15.96■□□□□ 0.15
ERCC1-213ENST00000592023 PAEPP09466 180 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 SETSIPP0DME0 302 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 YWHAGP61981 247 aaKnown RBP eCLIP15.96■□□□□ 0.15
ERCC1-213ENST00000592023 GAD2Q05329 585 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 MESP2Q0VG99 397 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 EFEMP1Q12805 493 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 ANO4Q32M45 955 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 KLHDC10Q6PID8 442 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 PRR23BQ6ZRT6 265 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 RSRC2Q7L4I2 434 aaKnown RBP15.96■□□□□ 0.15
ERCC1-213ENST00000592023 LONP2Q86WA8 852 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 SFTPA1Q8IWL2 248 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 ARHGAP18Q8N392 663 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 DCLK2Q8N568 766 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 NDRG1Q92597 394 aaKnown RBP15.96■□□□□ 0.15
ERCC1-213ENST00000592023 RUBCNQ92622 972 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 ACDQ96AP0 544 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 KREMEN1Q96MU8 473 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 ZSWIM1Q9BR11 485 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 UBXN6Q9BZV1 441 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 SPHK2Q9NRA0 654 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.96■□□□□ 0.15
ERCC1-213ENST00000592023 USP34Q70CQ2 3546 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 MYOFQ9NZM1 2061 aa15.96■□□□□ 0.15
ERCC1-213ENST00000592023 HOXC11O43248 304 aaPredicted RBP15.95■□□□□ 0.14
ERCC1-213ENST00000592023 GREM1O60565 184 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 ZBED1O96006 694 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 HMBSP08397 361 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 KRT5P13647 590 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 EIF2DP41214 584 aaKnown RBP15.95■□□□□ 0.14
ERCC1-213ENST00000592023 MTIF2P46199 727 aaKnown RBP15.95■□□□□ 0.14
ERCC1-213ENST00000592023 PLA2G4AP47712 749 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 RGS7P49802 495 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 DMC1Q14565 340 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 C2orf27AQ580R0 203 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 BTBD8Q5XKL5 378 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 LCLAT1Q6UWP7 414 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 CLEC17AQ6ZS10 378 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 HTR3DQ70Z44 454 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 TMEM25Q86YD3 366 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 SIX6OS1Q8N1H7 587 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 NAT16Q8N8M0 369 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 SECISBP2LQ93073 1101 aaKnown RBP15.95■□□□□ 0.14
ERCC1-213ENST00000592023 IPO9Q96P70 1041 aaKnown RBP15.95■□□□□ 0.14
ERCC1-213ENST00000592023 CDK5RAP1Q96SZ6 601 aaKnown RBP15.95■□□□□ 0.14
ERCC1-213ENST00000592023 PNKPQ96T60 521 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 CRACR2AQ9BSW2 395 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 ARHGEF4Q9NR80 690 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 LMBRD1Q9NUN5 540 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 RAB23Q9ULC3 237 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 KIAA1257Q9ULG3 409 aa15.95■□□□□ 0.14
ERCC1-213ENST00000592023 ZFHX2Q9C0A1 2572 aaPredicted RBP15.95■□□□□ 0.14
ERCC1-213ENST00000592023 VPS13AQ96RL7 3174 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.94■□□□□ 0.14
ERCC1-213ENST00000592023 NEDD8-MDP1E9PL57 170 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 K7EQS6 105 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 PIK3R2O00459 728 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 STC2O76061 302 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 KAT7O95251 611 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 APODP05090 189 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 ZNF132P52740 706 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 SIM2Q14190 667 aaPredicted RBP15.94■□□□□ 0.14
ERCC1-213ENST00000592023 PKDCCQ504Y2 493 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 GJB7Q6PEY0 223 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 TRIM65Q6PJ69 517 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 TPGS1Q6ZTW0 290 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 SYT13Q7L8C5 426 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 BHLHA9Q7RTU4 235 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 WDR5BQ86VZ2 330 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 IRF2BP1Q8IU81 584 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 ETFBKMTQ8IXQ9 262 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 USP33Q8TEY7 942 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 GBP4Q96PP9 640 aa15.94■□□□□ 0.14
ERCC1-213ENST00000592023 UBE2TQ9NPD8 197 aaPredicted RBP15.94■□□□□ 0.14
ERCC1-213ENST00000592023 HRO43593 1189 aa15.93■□□□□ 0.14
ERCC1-213ENST00000592023 TULP3O75386 442 aa15.93■□□□□ 0.14
ERCC1-213ENST00000592023 LCP1P13796 627 aa15.93■□□□□ 0.14
ERCC1-213ENST00000592023 HOXA6P31267 233 aa15.93■□□□□ 0.14
ERCC1-213ENST00000592023 APBA1Q02410 837 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms