RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TUFMP49411 452 aaKnown RBP15.73■□□□□ 0.11
CIRBP-228ENST00000590347 SF3B4Q15427 424 aaKnown RBP eCLIP15.73■□□□□ 0.115e-12■■■■■ 35.9
CIRBP-228ENST00000590347 SHROOM1Q2M3G4 852 aaPredicted RBP15.73■□□□□ 0.11
CIRBP-228ENST00000590347 USH1GQ495M9 461 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 PLEKHA7Q6IQ23 1121 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 ADGRF4Q8IZF3 695 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 CERS5Q8N5B7 392 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 IRGQQ8WZA9 623 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 C12orf43Q96C57 262 aaKnown RBP15.73■□□□□ 0.11
CIRBP-228ENST00000590347 PPP1R14BQ96C90 147 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 APOPT1Q96IL0 206 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 PLEKHA8Q96JA3 519 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 P2RX7Q99572 595 aaKnown RBP15.73■□□□□ 0.11
CIRBP-228ENST00000590347 ANO3Q9BYT9 981 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 TBCCD1Q9NVR7 557 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 POU2F3Q9UKI9 436 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 ZNF536O15090 1300 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 CHRNA5P30532 468 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 RPL10AP62906 217 aaKnown RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 FGD3Q5JSP0 725 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 OGFRL1Q5TC84 451 aaPredicted RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 ADGRD1Q6QNK2 874 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 KYAT3Q6YP21 454 aaKnown RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 WDR75Q8IWA0 830 aaKnown RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 LZTR1Q8N653 840 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 ZNF713Q8N859 430 aaPredicted RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 BBOF1Q8ND07 529 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 TFB1MQ8WVM0 346 aaKnown RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 ATAD3AQ9NVI7 634 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 PNPOQ9NVS9 261 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 PKD2L1Q9P0L9 805 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 DNAJB4Q9UDY4 337 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 RNF11Q9Y3C5 154 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 RREB1Q92766 1687 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 ARAP2Q8WZ64 1704 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 LIASO43766 372 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 ENTPD3O75355 529 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 EIF2AK2P19525 551 aaKnown RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 NME3Q13232 169 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 RNASEH2BQ5TBB1 312 aaKnown RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 CHST15Q7LFX5 561 aaPredicted RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 HPS1Q92902 700 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 PGBD4Q96DM1 585 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 MAML3Q96JK9 1138 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 Q9H521 79 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 ZNF287Q9HBT7 754 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 UVRAGQ9P2Y5 699 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 DOCK2Q92608 1830 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 TESPA1A2RU30 521 aaPredicted RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 CXorf49A8MYA2 514 aaPredicted RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 TMEM63AO94886 807 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 MAP3K6O95382 1288 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 F7P08709 466 aaPredicted RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 ADRA2BP18089 450 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 XRCC1P18887 633 aaPredicted RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 HOXA13P31271 388 aaPredicted RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 MAN1A1P33908 653 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 ELK3P41970 407 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 SLC1A1P43005 524 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 SEPT6Q14141 434 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 SMTNL2Q2TAL5 461 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 PPM1LQ5SGD2 360 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 FAXCQ5TGI0 409 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 MROH9Q5TGP6 573 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 PPP1R18Q6NYC8 613 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 KCNT2Q6UVM3 1135 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 DPP8Q6V1X1 898 aaPredicted RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 SYDE1Q6ZW31 735 aaPredicted RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 DDHD1Q8NEL9 900 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 CEP44Q9C0F1 390 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 PDGFDQ9GZP0 370 aaPredicted RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 JMJD4Q9H9V9 463 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 DDX4Q9NQI0 724 aaKnown RBP15.72■□□□□ 0.11
CIRBP-228ENST00000590347 CROTQ9UKG9 612 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 STK24Q9Y6E0 443 aa15.72■□□□□ 0.11
CIRBP-228ENST00000590347 GOLGA8QA0A0J9YX86 632 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 GOLGA8OA6NCC3 632 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 GOLGA8NF8WBI6 632 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 SIN3BO75182 1162 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 BBOX1O75936 387 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 KRT1P04264 644 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 LDHCP07864 332 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 MZF1P28698 734 aaPredicted RBP15.71■□□□□ 0.11
CIRBP-228ENST00000590347 SERPINB5P36952 375 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 SLC18A1P54219 525 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 GSTO1P78417 241 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 APOFQ13790 326 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 GPR107Q5VW38 600 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 TATDN1Q6P1N9 297 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 BTBD9Q96Q07 612 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 PCDH12Q9NPG4 1184 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 GPRC5CQ9NQ84 441 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 HESX1Q9UBX0 185 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 ARHGAP26Q9UNA1 814 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 DAGLAQ9Y4D2 1042 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 KBTBD13C9JR72 458 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 GIPC1O14908 333 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 PIM1P11309 404 aaPredicted RBP15.71■□□□□ 0.11
CIRBP-228ENST00000590347 PSMC3P17980 439 aa15.71■□□□□ 0.11
CIRBP-228ENST00000590347 KRT80Q6KB66 452 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms