RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 SUSD2Q9UGT4 822 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 MBD1Q9UIS9 605 aaPredicted RBP11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 RALYQ9UKM9 306 aaKnown RBP11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 ANK1P16157 1881 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 ATRXP46100 2492 aa11.37□□□□□ -0.59
CSNK1D-226ENST00000585026 SCAMP3O14828 347 aaKnown RBP11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 COCHO43405 550 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 HYAL3O43820 417 aaPredicted RBP11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 ADAM23O75077 832 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 TULP3O75386 442 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 TOP3BO95985 862 aaKnown RBP11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 CST3P01034 146 aaPredicted RBP11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 HOXB2P14652 356 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 GNSP15586 552 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 AP3M2P53677 418 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 ZNF33AQ06730 810 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 SLC14A1Q13336 389 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 PNOCQ13519 176 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 PSMD6Q15008 389 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 SYCP2LQ5T4T6 812 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 SNX30Q5VWJ9 437 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 GRAMD4Q6IC98 578 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 ETFBKMTQ8IXQ9 262 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 CHPFQ8IZ52 775 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 NAT16Q8N8M0 369 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 TERB1Q8NA31 727 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 XXYLT1Q8NBI6 393 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 RDH13Q8NBN7 331 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 SCFD1Q8WVM8 642 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 FOXJ1Q92949 421 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 CCDC127Q96BQ5 260 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 CGRRF1Q99675 332 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 C7orf25Q9BPX7 421 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 BPIFA3Q9BQP9 254 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 MED10Q9BTT4 135 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 B3GNT5Q9BYG0 378 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 FGFBP2Q9BYJ0 223 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 GTPBP4Q9BZE4 634 aaKnown RBP11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 TRIM9Q9C026 710 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 ZNF518BQ9C0D4 1074 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 GRPEL1Q9HAV7 217 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 DMAP1Q9NPF5 467 aaPredicted RBP11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.36□□□□□ -0.595e-7■■■■■ 34.9
CSNK1D-226ENST00000585026 CALCOCO1Q9P1Z2 691 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 WDR35Q9P2L0 1181 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 CGNQ9P2M7 1197 aaKnown RBP11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 NXF1Q9UBU9 619 aaKnown RBP11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 LSM7Q9UK45 103 aaKnown RBP11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 STARD13Q9Y3M8 1113 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 PCDHB9Q9Y5E1 797 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 EML5Q05BV3 1969 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 THADAQ6YHU6 1953 aa11.36□□□□□ -0.59
CSNK1D-226ENST00000585026 PTPRJQ12913 1337 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 ATXN2Q99700 1313 aaKnown RBP11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 SPAARA0A1B0GVQ0 90 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 ARHGAP33O14559 1287 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 NDUFS2O75306 463 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 P4HA1P13674 534 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 GABRG2P18507 467 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 EHHADHQ08426 723 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 COL9A2Q14055 689 aaPredicted RBP11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 MORC3Q14149 939 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 ACAP1Q15027 740 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 E2F5Q15329 346 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 WDR45BQ5MNZ6 344 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 SFTPA1Q8IWL2 248 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 RGL4Q8IZJ4 473 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 MINDY1Q8N5J2 469 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 ZNF507Q8TCN5 953 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 SMARCE1Q969G3 411 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 SMARCD1Q96GM5 515 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 FBXO44Q9H4M3 255 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 CAPN10Q9HC96 672 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 AGPAT3Q9NRZ7 376 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 DNAJC17Q9NVM6 304 aaKnown RBP11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 CHORDC1Q9UHD1 332 aaPredicted RBP11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 LHX6Q9UPM6 363 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 UBE4BO95155 1302 aa11.35□□□□□ -0.59
CSNK1D-226ENST00000585026 ZFHX4Q86UP3 3567 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 OBSL1O75147 1896 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 CFAP47Q6ZTR5 3102 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 GON4LQ3T8J9 2241 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 ANTXRLA6NF34 631 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 GFRA2O00451 464 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 CLDN5O00501 218 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 PRR29P0C7W0 189 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 CHRM1P11229 460 aaPredicted RBP11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 CYP2J2P51589 502 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 SLC5A3P53794 718 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 MYL6P60660 151 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 ASIC1P78348 528 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 CYP24A1Q07973 514 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 MESP2Q0VG99 397 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 BIRC3Q13489 604 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 ANO6Q4KMQ2 910 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 ZNF667Q5HYK9 610 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 FAM26FQ5R3K3 315 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 FAM35AQ86V20 835 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 BBS7Q8IWZ6 715 aa11.34□□□□□ -0.59
CSNK1D-226ENST00000585026 PHTF2Q8N3S3 785 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms