RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 HHIPQ96QV1 700 aa18.81■□□□□ 0.6
ERBB2-221ENST00000584888 RTKNQ9BST9 563 aa18.81■□□□□ 0.6
ERBB2-221ENST00000584888 MYOFQ9NZM1 2061 aa18.81■□□□□ 0.6
ERBB2-221ENST00000584888 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.8■□□□□ 0.6
ERBB2-221ENST00000584888 COCHO43405 550 aa18.8■□□□□ 0.6
ERBB2-221ENST00000584888 ERCC5P28715 1186 aaPredicted RBP18.8■□□□□ 0.6
ERBB2-221ENST00000584888 OPRD1P41143 372 aa18.8■□□□□ 0.6
ERBB2-221ENST00000584888 CETN1Q12798 172 aa18.8■□□□□ 0.6
ERBB2-221ENST00000584888 GAB4Q2WGN9 574 aa18.8■□□□□ 0.6
ERBB2-221ENST00000584888 HECTD3Q5T447 861 aa18.8■□□□□ 0.6
ERBB2-221ENST00000584888 KBTBD6Q86V97 674 aa18.8■□□□□ 0.6
ERBB2-221ENST00000584888 TTC30AQ86WT1 665 aa18.8■□□□□ 0.6
ERBB2-221ENST00000584888 ARHGEF19Q8IW93 802 aa18.8■□□□□ 0.6
ERBB2-221ENST00000584888 ADGRG2Q8IZP9 1017 aa18.8■□□□□ 0.6
ERBB2-221ENST00000584888 CNOT6LQ96LI5 555 aaKnown RBP18.8■□□□□ 0.6
ERBB2-221ENST00000584888 CCSER2Q9H7U1 834 aa18.8■□□□□ 0.6
ERBB2-221ENST00000584888 KIAA1257Q9ULG3 409 aa18.8■□□□□ 0.6
ERBB2-221ENST00000584888 DNAH14Q0VDD8 3507 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 DCDC2BA2VCK2 349 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 RNF225M0QZC1 329 aaPredicted RBP18.79■□□□□ 0.6
ERBB2-221ENST00000584888 SLC9A3R1O14745 358 aaPredicted RBP18.79■□□□□ 0.6
ERBB2-221ENST00000584888 SCAMP3O14828 347 aaKnown RBP18.79■□□□□ 0.6
ERBB2-221ENST00000584888 AXIN1O15169 862 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 MBL2P11226 248 aaPredicted RBP18.79■□□□□ 0.6
ERBB2-221ENST00000584888 GCNT1Q02742 428 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 DMC1Q14565 340 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 CT47A1Q5JQC4 288 aaPredicted RBP18.79■□□□□ 0.6
ERBB2-221ENST00000584888 RAB41Q5JT25 222 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 ZNF276Q8N554 614 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 NETO1Q8TDF5 533 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 ACDQ96AP0 544 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 LOXL4Q96JB6 756 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 KREMEN1Q96MU8 473 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 THAP9Q9H5L6 903 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 NMUR1Q9HB89 426 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 OSER1Q9NX31 292 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 CFAP97Q9P2B7 532 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 CNTN6Q9UQ52 1028 aa18.79■□□□□ 0.6
ERBB2-221ENST00000584888 K7EQS6 105 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 CYP17A1P05093 508 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 PAEPP09466 180 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 VDRP11473 427 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 ZNF132P52740 706 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 DHCR24Q15392 516 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 PKDCCQ504Y2 493 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 SGO2Q562F6 1265 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 CCDC186Q7Z3E2 898 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 SCD5Q86SK9 330 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 PPM1KQ8N3J5 372 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 CCDC26Q8TAB7 109 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 USP33Q8TEY7 942 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 ZSWIM1Q9BR11 485 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 INTS2Q9H0H0 1204 aaKnown RBP18.78■□□□□ 0.6
ERBB2-221ENST00000584888 ARRDC1-AS1Q9H2J1 176 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 CYLDQ9NQC7 956 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 TLR8Q9NR97 1041 aaKnown RBP18.78■□□□□ 0.6
ERBB2-221ENST00000584888 RALGAPA1Q6GYQ0 2036 aa18.78■□□□□ 0.6
ERBB2-221ENST00000584888 NCOR2Q9Y618 2525 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 SPTBN2O15020 2390 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 O00370 1275 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 SLC30A4O14863 429 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 CYP26A1O43174 497 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 GDF9O60383 454 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 FOXD2O60548 495 aaPredicted RBP18.77■□□□□ 0.6
ERBB2-221ENST00000584888 APBB3O95704 486 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 RHBDF2Q6PJF5 856 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 TMEM270Q6UE05 265 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 LCLAT1Q6UWP7 414 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 RRAGAQ7L523 313 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 PIGZQ86VD9 579 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 DDX42Q86XP3 938 aaKnown RBP eCLIP18.77■□□□□ 0.6
ERBB2-221ENST00000584888 TFAP2BQ92481 460 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 JAKMIP2Q96AA8 810 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 ZC3H10Q96K80 434 aaKnown RBP18.77■□□□□ 0.6
ERBB2-221ENST00000584888 EBF1Q9UH73 591 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 TSPAN16Q9UKR8 245 aa18.77■□□□□ 0.6
ERBB2-221ENST00000584888 A0A1W2PQH9 124 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 E2F8A0AVK6 867 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 GTPBP10A4D1E9 387 aaKnown RBP18.76■□□□□ 0.59
ERBB2-221ENST00000584888 ANTXRLA6NF34 631 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 TULP2O00295 520 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 TLR5O60602 858 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 SLC6A11P48066 632 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 SEC13P55735 322 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 PDE4CQ08493 712 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 CCDC6Q16204 474 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 CNGA2Q16280 664 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 GOLGA7BQ2TAP0 167 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 C2orf27AQ580R0 203 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 PM20D1Q6GTS8 502 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 KLHDC10Q6PID8 442 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 WBP2Q969T9 261 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 KLF16Q9BXK1 252 aaPredicted RBP18.76■□□□□ 0.59
ERBB2-221ENST00000584888 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.76■□□□□ 0.59
ERBB2-221ENST00000584888 PCDHB4Q9Y5E5 795 aa18.76■□□□□ 0.59
ERBB2-221ENST00000584888 XPO1O14980 1071 aaKnown RBP18.75■□□□□ 0.59
ERBB2-221ENST00000584888 GREM1O60565 184 aa18.75■□□□□ 0.59
ERBB2-221ENST00000584888 EPN2O95208 641 aa18.75■□□□□ 0.59
ERBB2-221ENST00000584888 TBX18O95935 607 aa18.75■□□□□ 0.59
ERBB2-221ENST00000584888 BCAT1P54687 386 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms