RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 WBP2Q969T9 261 aa13.04□□□□□ -0.32
TOP3A-215ENST00000583328 MRGPRX1Q96LB2 322 aa13.04□□□□□ -0.32
TOP3A-215ENST00000583328 GABRG3Q99928 467 aa13.04□□□□□ -0.32
TOP3A-215ENST00000583328 BBS2Q9BXC9 721 aa13.04□□□□□ -0.32
TOP3A-215ENST00000583328 B3GNT5Q9BYG0 378 aa13.04□□□□□ -0.32
TOP3A-215ENST00000583328 DPEP3Q9H4B8 488 aa13.04□□□□□ -0.32
TOP3A-215ENST00000583328 CCSER2Q9H7U1 834 aa13.04□□□□□ -0.32
TOP3A-215ENST00000583328 CD248Q9HCU0 757 aa13.04□□□□□ -0.32
TOP3A-215ENST00000583328 OLFML3Q9NRN5 406 aa13.04□□□□□ -0.32
TOP3A-215ENST00000583328 WDR35Q9P2L0 1181 aa13.04□□□□□ -0.32
TOP3A-215ENST00000583328 NME7Q9Y5B8 376 aa13.04□□□□□ -0.32
TOP3A-215ENST00000583328 MYOFQ9NZM1 2061 aa13.04□□□□□ -0.32
TOP3A-215ENST00000583328 PTPRJQ12913 1337 aa13.04□□□□□ -0.32
TOP3A-215ENST00000583328 TNRC6BQ9UPQ9 1833 aaKnown RBP13.04□□□□□ -0.32
TOP3A-215ENST00000583328 URB1O60287 2271 aaKnown RBP13.04□□□□□ -0.32
TOP3A-215ENST00000583328 APC2O95996 2303 aa13.04□□□□□ -0.32
TOP3A-215ENST00000583328 GOLGA8CPA6NN73 597 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 PRRT4C9JH25 899 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 GFRA2O00451 464 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 CST3P01034 146 aaPredicted RBP13.03□□□□□ -0.32
TOP3A-215ENST00000583328 PDIA4P13667 645 aaKnown RBP13.03□□□□□ -0.32
TOP3A-215ENST00000583328 TYRP14679 529 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 SYT1P21579 422 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 CYP4F3Q08477 520 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 SNX30Q5VWJ9 437 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 TPGS1Q6ZTW0 290 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 CBWD2Q8IUF1 395 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 WDR49Q8IV35 697 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 ZCCHC9Q8N567 271 aaKnown RBP13.03□□□□□ -0.32
TOP3A-215ENST00000583328 GLIS3Q8NEA6 775 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 SCAMP5Q8TAC9 235 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 DNASE2BQ8WZ79 361 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 TOE1Q96GM8 510 aaKnown RBP13.03□□□□□ -0.32
TOP3A-215ENST00000583328 KCNK16Q96T55 309 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 DUSP9Q99956 384 aaKnown RBP13.03□□□□□ -0.32
TOP3A-215ENST00000583328 MED10Q9BTT4 135 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 FGFBP2Q9BYJ0 223 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 GAREM1Q9H706 876 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 PRDM16Q9HAZ2 1276 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 IL21RQ9HBE5 538 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 PANK4Q9NVE7 773 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 CACNA2D2Q9NY47 1150 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 GMIPQ9P107 970 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 PCDH15Q96QU1 1955 aa13.03□□□□□ -0.32
TOP3A-215ENST00000583328 VPS37CA5D8V6 355 aaPredicted RBP13.02□□□□□ -0.33
TOP3A-215ENST00000583328 WASH3PC4AMC7 463 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 CACNG3O60359 315 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 CILPO75339 1184 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 CER1O95813 267 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 NCAM1P13591 858 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 TNNI1P19237 187 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 MATKP42679 507 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 TUBP50607 506 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 SLC5A3P53794 718 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 WDR72Q3MJ13 1102 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 IL27RAQ6UWB1 636 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 HTR3DQ70Z44 454 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 RDH13Q8NBN7 331 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 B3GALNT2Q8NCR0 500 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 RHBDD1Q8TEB9 315 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 CDC6Q99741 560 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 GPR174Q9BXC1 333 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 TM7SF3Q9NS93 570 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 WSB2Q9NYS7 404 aaPredicted RBP13.02□□□□□ -0.33
TOP3A-215ENST00000583328 DKK4Q9UBT3 224 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 ATP8B3O60423 1300 aa13.02□□□□□ -0.33
TOP3A-215ENST00000583328 WDFY3Q8IZQ1 3526 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 TRABD2BA6NFA1 517 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 BCAT2O15382 392 aaPredicted RBP13.01□□□□□ -0.33
TOP3A-215ENST00000583328 STX6O43752 255 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 ATXN1LP0C7T5 689 aaKnown RBP13.01□□□□□ -0.33
TOP3A-215ENST00000583328 ZNF883P0CG24 379 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 DLATP10515 647 aaKnown RBP13.01□□□□□ -0.33
TOP3A-215ENST00000583328 TXLNAP40222 546 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 DGKGP49619 791 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 TRPC3Q13507 836 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 STARD3Q14849 445 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 SUZ12Q15022 739 aaKnown RBP13.01□□□□□ -0.33
TOP3A-215ENST00000583328 HLA-BQ31612 363 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 DCAF12L1Q5VU92 463 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 METTL3Q86U44 580 aaKnown RBP13.01□□□□□ -0.33
TOP3A-215ENST00000583328 MARCH9Q86YJ5 346 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 GALNT15Q8N3T1 639 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 CADM4Q8NFZ8 388 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 KIAA1586Q9HCI6 787 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 ITM2CQ9NQX7 267 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.01□□□□□ -0.33
TOP3A-215ENST00000583328 COMMD8Q9NX08 183 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 IL37Q9NZH6 218 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 HSPBP1Q9NZL4 362 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 NXF1Q9UBU9 619 aaKnown RBP13.01□□□□□ -0.33
TOP3A-215ENST00000583328 LSM7Q9UK45 103 aaKnown RBP13.01□□□□□ -0.33
TOP3A-215ENST00000583328 FNDC3AQ9Y2H6 1198 aaKnown RBP13.01□□□□□ -0.33
TOP3A-215ENST00000583328 NFE2L3Q9Y4A8 694 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 STON1Q9Y6Q2 735 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 HELZP42694 1942 aaKnown RBP13.01□□□□□ -0.33
TOP3A-215ENST00000583328 PLXND1Q9Y4D7 1925 aa13.01□□□□□ -0.33
TOP3A-215ENST00000583328 METTL12A8MUP2 240 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 TLR5O60602 858 aa13□□□□□ -0.33
TOP3A-215ENST00000583328 TBX18O95935 607 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms