RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	WAS	P42768	502 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	BRCC3	P46736	316 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	CLCNKB	P51801	687 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	COPA	P53621	1224 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	FOLH1	Q04609	750 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	RAD51AP2	Q09MP3	1159 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	GPR17	Q13304	367 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	SLC10A6	Q3KNW5	377 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	C10orf76	Q5T2E6	689 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	RHBDF2	Q6PJF5	856 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	TMC6	Q7Z403	805 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	AACS	Q86V21	672 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	MCU	Q8NE86	351 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	PRCC	Q92733	491 aa	Predicted RBP	5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	SIPA1	Q96FS4	1042 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	MS4A3	Q96HJ5	214 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	FEM1C	Q96JP0	617 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	NLRP4	Q96MN2	994 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	MXRA8	Q9BRK3	442 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	TRIM6	Q9C030	488 aa	Predicted RBP	5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	NAPB	Q9H115	298 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	OSBPL2	Q9H1P3	480 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	VAT1L	Q9HCJ6	419 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	MLXIPL	Q9NP71	852 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	NCKIPSD	Q9NZQ3	722 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	SUCLA2	Q9P2R7	463 aa	Predicted RBP	5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	ARHGAP26	Q9UNA1	814 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	RBM19	Q9Y4C8	960 aa	Known RBP	5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	PCDHB6	Q9Y5E3	794 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	MYO7B	Q6PIF6	2116 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	AKAP6	Q13023	2319 aa		5.39	□□□□□ -1.55
MSI2-216	ENST00000582772	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	5.38	□□□□□ -1.55
MSI2-216	ENST00000582772		A0A0B4J269	797 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772		A0A1B0GUH1	482 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	EME2	A4GXA9	379 aa	Predicted RBP	5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	TLR4	O00206	839 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	HOXC11	O43248	304 aa	Predicted RBP	5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	DUX1	O43812	170 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	TADA3	O75528	432 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	RFPL1	O75677	317 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	SURF6	O75683	361 aa	Known RBP	5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	ERLIN2	O94905	339 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	MAP3K6	O95382	1288 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	NFIC	P08651	508 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	JMJD7	P0C870	316 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	ADH5	P11766	374 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	ATF6	P18850	670 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	DGKA	P23743	735 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	COPB1	P53618	953 aa	Known RBP	5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	MC1R	Q01726	317 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	ZNF177	Q13360	481 aa	Predicted RBP	5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	STARD3	Q14849	445 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	VEPH1	Q14D04	833 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	DEFB109B	Q30KR1	87 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	DCAF10	Q5QP82	559 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	JMJD6	Q6NYC1	403 aa	Predicted RBP	5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	USP17L6P	Q6QN14	398 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	SPATS2	Q86XZ4	545 aa	Known RBP	5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	TMPRSS6	Q8IU80	811 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	REXO1	Q8N1G1	1221 aa	Known RBP	5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	ST6GALNAC3	Q8NDV1	305 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	SH3RF2	Q8TEC5	729 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	MRPS31	Q92665	395 aa	Known RBP	5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	SRRT	Q9BXP5	876 aa	Known RBP	5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	STRADB	Q9C0K7	418 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	NRBP2	Q9NSY0	501 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	5.38	□□□□□ -1.55	2e-6	■■■■□ 24.6
MSI2-216	ENST00000582772	KLK14	Q9P0G3	267 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	EXOC6B	Q9Y2D4	811 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	COL4A3BP	Q9Y5P4	624 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	STK36	Q9NRP7	1315 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	UBR4	Q5T4S7	5183 aa		5.38	□□□□□ -1.55
MSI2-216	ENST00000582772	SLC9A3R1	O14745	358 aa	Predicted RBP	5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	NPC1	O15118	1278 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	TULP3	O75386	442 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	OAZ2	O95190	189 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	RTN3	O95197	1032 aa	Predicted RBP	5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	GNAI2	P04899	355 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	STS	P08842	583 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	ALPPL2	P10696	532 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	ACADM	P11310	421 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	HMGA1	P17096	107 aa	Known RBP	5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	NMT1	P30419	496 aa	Known RBP	5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	PMS2	P54278	862 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	ITGA1	P56199	1179 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	PRKCE	Q02156	737 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	CTDSPL2	Q05D32	466 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	FOXM1	Q08050	763 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	OVGP1	Q12889	678 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	AMHR2	Q16671	573 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	ERICH6B	Q5W0A0	696 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	KIAA0895L	Q68EN5	471 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	SLC27A1	Q6PCB7	646 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	IQCH	Q86VS3	1027 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	HPS6	Q86YV9	775 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	IFNLR1	Q8IU57	520 aa	Predicted RBP	5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	APLF	Q8IW19	511 aa	Predicted RBP	5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	CUL5	Q93034	780 aa		5.37	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms