RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 ECT2Q9H8V3 914 aa17.24■□□□□ 0.35
IFT20-210ENST00000580357 NMUR1Q9HB89 426 aa17.24■□□□□ 0.35
IFT20-210ENST00000580357 ABCC13Q9NSE7 274 aa17.24■□□□□ 0.35
IFT20-210ENST00000580357 SMPD4Q9NXE4 827 aa17.24■□□□□ 0.35
IFT20-210ENST00000580357 LSM7Q9UK45 103 aaKnown RBP17.24■□□□□ 0.35
IFT20-210ENST00000580357 STRIP2Q9ULQ0 834 aa17.24■□□□□ 0.35
IFT20-210ENST00000580357 PCDHGC3Q9UN70 934 aa17.24■□□□□ 0.35
IFT20-210ENST00000580357 SYCE3A1L190 88 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 LGALS16A8MUM7 142 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 TULP2O00295 520 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 SART1O43290 800 aaKnown RBP17.23■□□□□ 0.35
IFT20-210ENST00000580357 CD72P21854 359 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 CTHP32929 405 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 RPL34P49207 117 aaKnown RBP17.23■□□□□ 0.35
IFT20-210ENST00000580357 APBA1Q02410 837 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 UBXN1Q04323 297 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 TNK2Q07912 1038 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 EML3Q32P44 896 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 DGKKQ5KSL6 1271 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 HTR3DQ70Z44 454 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 RSRC2Q7L4I2 434 aaKnown RBP17.23■□□□□ 0.35
IFT20-210ENST00000580357 CCDC105Q8IYK2 499 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 DTWD2Q8NBA8 298 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 RNF139Q8WU17 664 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 TRIM62Q9BVG3 475 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 NAA15Q9BXJ9 866 aaKnown RBP17.23■□□□□ 0.35
IFT20-210ENST00000580357 FOXQ1Q9C009 403 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 DCLK3Q9C098 648 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 LINC00597Q9H2U6 94 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 HPS4Q9NQG7 708 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 OSER1Q9NX31 292 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 ZNF510Q9Y2H8 683 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 CEP83Q9Y592 693 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 WNT6Q9Y6F9 365 aa17.23■□□□□ 0.35
IFT20-210ENST00000580357 TBX18O95935 607 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 DCNP07585 359 aaKnown RBP17.22■□□□□ 0.35
IFT20-210ENST00000580357 LCP1P13796 627 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 CLCN1P35523 988 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 PGFP49763 221 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 PTPN5P54829 565 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 ADIGQ0VDE8 80 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 LRRC32Q14392 662 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 BSPRYQ5W0U4 402 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 TRIM68Q6AZZ1 485 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 DHX40Q8IX18 779 aaKnown RBP17.22■□□□□ 0.35
IFT20-210ENST00000580357 SYNPOQ8N3V7 929 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 RIN3Q8TB24 985 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 ZFRQ96KR1 1074 aaKnown RBP17.22■□□□□ 0.35
IFT20-210ENST00000580357 PCMTD1Q96MG8 357 aaPredicted RBP17.22■□□□□ 0.35
IFT20-210ENST00000580357 NOX5Q96PH1 765 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 ERGIC2Q96RQ1 377 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 LMAN1LQ9HAT1 526 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 DLGAP2Q9P1A6 1054 aa17.22■□□□□ 0.35
IFT20-210ENST00000580357 NDRG2Q9UN36 371 aaKnown RBP17.22■□□□□ 0.35
IFT20-210ENST00000580357 MTF2Q9Y483 593 aaPredicted RBP17.22■□□□□ 0.35
IFT20-210ENST00000580357 SHISA7A6NL88 538 aa17.21■□□□□ 0.35
IFT20-210ENST00000580357 TRDMT1O14717 391 aaKnown RBP17.21■□□□□ 0.35
IFT20-210ENST00000580357 ARSAP15289 507 aa17.21■□□□□ 0.35
IFT20-210ENST00000580357 TARSP26639 723 aaKnown RBP17.21■□□□□ 0.35
IFT20-210ENST00000580357 RGS7P49802 495 aa17.21■□□□□ 0.35
IFT20-210ENST00000580357 DAOAP59103 153 aa17.21■□□□□ 0.35
IFT20-210ENST00000580357 GRSF1Q12849 480 aaKnown RBP eCLIP17.21■□□□□ 0.35
IFT20-210ENST00000580357 PREPLQ4J6C6 727 aaPredicted RBP17.21■□□□□ 0.35
IFT20-210ENST00000580357 MAMSTRQ6ZN01 415 aa17.21■□□□□ 0.35
IFT20-210ENST00000580357 TMEM110Q86TL2 294 aa17.21■□□□□ 0.35
IFT20-210ENST00000580357 NEK11Q8NG66 645 aa17.21■□□□□ 0.35
IFT20-210ENST00000580357 CCDC26Q8TAB7 109 aa17.21■□□□□ 0.35
IFT20-210ENST00000580357 TTC8Q8TAM2 541 aa17.21■□□□□ 0.35
IFT20-210ENST00000580357 SLC4A5Q9BY07 1137 aa17.21■□□□□ 0.35
IFT20-210ENST00000580357 HSD3B7Q9H2F3 369 aa17.21■□□□□ 0.35
IFT20-210ENST00000580357 ST7Q9NRC1 585 aa17.21■□□□□ 0.35
IFT20-210ENST00000580357 FHOD1Q9Y613 1164 aa17.21■□□□□ 0.35
IFT20-210ENST00000580357 PATJQ8NI35 1801 aa17.21■□□□□ 0.35
IFT20-210ENST00000580357 ADH1CP00326 375 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 CALCAP01258 141 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 GJA4P35212 333 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 FZD5Q13467 585 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 IQCB1Q15051 598 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 SYCP1Q15431 976 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 DENND1BQ6P3S1 775 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 BEND5Q7L4P6 421 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 ZNF677Q86XU0 584 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 FMNL3Q8IVF7 1028 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 ZNF687Q8N1G0 1237 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 SPAG5Q96R06 1193 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 GANQ9H2C0 597 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 PDCL3Q9H2J4 239 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 MARCH2Q9P0N8 246 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 SIK3Q9Y2K2 1263 aa17.2■□□□□ 0.34
IFT20-210ENST00000580357 YJEFN3A6XGL0 299 aa17.19■□□□□ 0.34
IFT20-210ENST00000580357 E7ENQ6 273 aa17.19■□□□□ 0.34
IFT20-210ENST00000580357 LTFP02788 710 aa17.19■□□□□ 0.34
IFT20-210ENST00000580357 CHRNB1P11230 501 aa17.19■□□□□ 0.34
IFT20-210ENST00000580357 DRD1P21728 446 aa17.19■□□□□ 0.34
IFT20-210ENST00000580357 STAT1P42224 750 aa17.19■□□□□ 0.34
IFT20-210ENST00000580357 SOX9P48436 509 aa17.19■□□□□ 0.34
IFT20-210ENST00000580357 POLR2FP61218 127 aaKnown RBP17.19■□□□□ 0.34
IFT20-210ENST00000580357 GAD2Q05329 585 aa17.19■□□□□ 0.34
IFT20-210ENST00000580357 EFEMP1Q12805 493 aa17.19■□□□□ 0.34
IFT20-210ENST00000580357 PON2Q15165 354 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms