RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 SMYD5Q6GMV2 418 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 DPY19L2P1Q6NXN4 242 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 CAMKK1Q8N5S9 505 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 RBBP8NLQ8NC74 664 aaPredicted RBP13.47□□□□□ -0.25
CCDC57-211ENST00000578187 PDZD8Q8NEN9 1154 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 SCAMP5Q8TAC9 235 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 SH3RF2Q8TEC5 729 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 OVCA2Q8WZ82 227 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 CD101Q93033 1021 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 ACDQ96AP0 544 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 CYP2S1Q96SQ9 504 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 NAT10Q9H0A0 1025 aaKnown RBP13.47□□□□□ -0.25
CCDC57-211ENST00000578187 ECT2Q9H8V3 914 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 SIX2Q9NPC8 291 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 UBE2TQ9NPD8 197 aaPredicted RBP13.47□□□□□ -0.25
CCDC57-211ENST00000578187 TAB2Q9NYJ8 693 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 KIAA1257Q9ULG3 409 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 ARHGAP26Q9UNA1 814 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 PCDHB4Q9Y5E5 795 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 DCHS1Q96JQ0 3298 aa13.47□□□□□ -0.25
CCDC57-211ENST00000578187 RIF1Q5UIP0 2472 aaKnown RBP13.46□□□□□ -0.25
CCDC57-211ENST00000578187 C2orf78A6NCI8 922 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 ZNF840PA6NDX5 716 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 RNF225M0QZC1 329 aaPredicted RBP13.46□□□□□ -0.25
CCDC57-211ENST00000578187 O00370 1275 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 SLC9A3R1O14745 358 aaPredicted RBP13.46□□□□□ -0.25
CCDC57-211ENST00000578187 HRO43593 1189 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 RNF40O75150 1001 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 RPP40O75818 363 aaKnown RBP13.46□□□□□ -0.25
CCDC57-211ENST00000578187 OLFM2O95897 454 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 CD19P15391 556 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 TCF3P15923 654 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 GJA4P35212 333 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 APBA1Q02410 837 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 DMWDQ09019 674 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 IFRD2Q12894 506 aaPredicted RBP13.46□□□□□ -0.25
CCDC57-211ENST00000578187 TAF10Q12962 218 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 GOLGA7BQ2TAP0 167 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 SNX30Q5VWJ9 437 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 FSTL4Q6MZW2 842 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 GJB7Q6PEY0 223 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 GPRIN1Q7Z2K8 1008 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 TTC30AQ86WT1 665 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 DDX42Q86XP3 938 aaKnown RBP eCLIP13.46□□□□□ -0.25
CCDC57-211ENST00000578187 AOPEPQ8N6M6 819 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 ANKRD52Q8NB46 1076 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 FBXO32Q969P5 355 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 RTKNQ9BST9 563 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 FBXO44Q9H4M3 255 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 LIMA1Q9UHB6 759 aaKnown RBP13.46□□□□□ -0.25
CCDC57-211ENST00000578187 TSPAN16Q9UKR8 245 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 WNT6Q9Y6F9 365 aa13.46□□□□□ -0.25
CCDC57-211ENST00000578187 SYCE3A1L190 88 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 OTOL1A6NHN0 477 aaPredicted RBP13.45□□□□□ -0.26
CCDC57-211ENST00000578187 OAS1P00973 400 aaKnown RBP13.45□□□□□ -0.26
CCDC57-211ENST00000578187 EGFP01133 1207 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 ZDHHC11BP0C7U3 371 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 GALK1P51570 392 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 BCAT1P54687 386 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 MFAP3P55082 362 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 KCNMA1Q12791 1236 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 CSRP2Q16527 193 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 SKOR2Q2VWA4 1001 aaPredicted RBP13.45□□□□□ -0.26
CCDC57-211ENST00000578187 EML3Q32P44 896 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 PKDCCQ504Y2 493 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 LCLAT1Q6UWP7 414 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 CACNA2D4Q7Z3S7 1137 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 DHX40Q8IX18 779 aaKnown RBP13.45□□□□□ -0.26
CCDC57-211ENST00000578187 KIAA1958Q8N8K9 716 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 NETO1Q8TDF5 533 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 GAB3Q8WWW8 586 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 TFAP2BQ92481 460 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 SHC3Q92529 594 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 SLC22A12Q96S37 553 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 ZSWIM1Q9BR11 485 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 UBXN6Q9BZV1 441 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 SEMA4GQ9NTN9 838 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 AJAP1Q9UKB5 411 aaPredicted RBP13.45□□□□□ -0.26
CCDC57-211ENST00000578187 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCDC57-211ENST00000578187 DMXL1Q9Y485 3027 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 ZNF292O60281 2723 aa13.45□□□□□ -0.26
CCDC57-211ENST00000578187 BECN2A8MW95 431 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 LEFTY2O00292 366 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 KRT5P13647 590 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 TUBP50607 506 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 KIF11P52732 1056 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 BST2Q10589 180 aaKnown RBP13.44□□□□□ -0.26
CCDC57-211ENST00000578187 SRSF5Q13243 272 aaKnown RBP13.44□□□□□ -0.26
CCDC57-211ENST00000578187 STILQ15468 1287 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 RAB41Q5JT25 222 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 APTXQ7Z2E3 356 aaKnown RBP13.44□□□□□ -0.26
CCDC57-211ENST00000578187 PIGZQ86VD9 579 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 FAM160A2Q8N612 972 aaPredicted RBP13.44□□□□□ -0.26
CCDC57-211ENST00000578187 C12orf50Q8NA57 414 aaPredicted RBP13.44□□□□□ -0.26
CCDC57-211ENST00000578187 RPLP0P6Q8NHW5 317 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 CHFRQ96EP1 664 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 LOXL4Q96JB6 756 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 VPS16Q9H269 839 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 GMIPQ9P107 970 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 HESX1Q9UBX0 185 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms