RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 PCSK9Q8NBP7 692 aaKnown RBP3.08□□□□□ -1.92
TOP2A-202ENST00000577541 ZNF398Q8TD17 642 aa3.08□□□□□ -1.92
TOP2A-202ENST00000577541 OSCP1Q8WVF1 389 aa3.08□□□□□ -1.92
TOP2A-202ENST00000577541 TRIM43Q96BQ3 446 aaPredicted RBP3.08□□□□□ -1.92
TOP2A-202ENST00000577541 CTHRC1Q96CG8 243 aa3.08□□□□□ -1.92
TOP2A-202ENST00000577541 MSLNLQ96KJ4 702 aa3.08□□□□□ -1.92
TOP2A-202ENST00000577541 NT5C1BQ96P26 610 aa3.08□□□□□ -1.92
TOP2A-202ENST00000577541 EFHD1Q9BUP0 239 aa3.08□□□□□ -1.92
TOP2A-202ENST00000577541 DHX36Q9H2U1 1008 aaKnown RBP3.08□□□□□ -1.92
TOP2A-202ENST00000577541 MRPL44Q9H9J2 332 aaKnown RBP3.08□□□□□ -1.92
TOP2A-202ENST00000577541 A1CFQ9NQ94 594 aaKnown RBP3.08□□□□□ -1.92
TOP2A-202ENST00000577541 TMEM184CQ9NVA4 438 aa3.08□□□□□ -1.92
TOP2A-202ENST00000577541 DNMT3BQ9UBC3 853 aaKnown RBP3.08□□□□□ -1.92
TOP2A-202ENST00000577541 hCG_1984214I3L0E3 225 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 MYO1CO00159 1063 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 CTNND1O60716 968 aaKnown RBP3.07□□□□□ -1.92
TOP2A-202ENST00000577541 SOCS5O75159 536 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 A1BGP04217 495 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 FGF3P11487 239 aaPredicted RBP3.07□□□□□ -1.92
TOP2A-202ENST00000577541 MYCLP12524 364 aaPredicted RBP3.07□□□□□ -1.92
TOP2A-202ENST00000577541 KLRC1P26715 233 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 TPTEP56180 551 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 APOA5Q6Q788 366 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 DEF8Q6ZN54 512 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 SFTPA1Q8IWL2 248 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 RAVER1Q8IY67 606 aaKnown RBP3.07□□□□□ -1.92
TOP2A-202ENST00000577541 SLC15A4Q8N697 577 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 LINC01465Q8N7H1 131 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 ABHD11Q8NFV4 315 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 LENG8Q96PV6 779 aaPredicted RBP3.07□□□□□ -1.92
TOP2A-202ENST00000577541 STK32BQ9NY57 414 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 STAP2Q9UGK3 403 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 CPA4Q9UI42 421 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 MRPS17Q9Y2R5 130 aaKnown RBP3.07□□□□□ -1.92
TOP2A-202ENST00000577541 SNX14Q9Y5W7 946 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 CDY1Q9Y6F8 540 aa3.07□□□□□ -1.92
TOP2A-202ENST00000577541 TP53BP1Q12888 1972 aaPredicted RBP3.07□□□□□ -1.92
TOP2A-202ENST00000577541 A6NNZ2 444 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 PRPF3O43395 683 aaKnown RBP3.06□□□□□ -1.92
TOP2A-202ENST00000577541 SCGB1D2O95969 90 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 ZBED1O96006 694 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 KITP10721 976 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 GKP32189 559 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 CACNB3P54284 484 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 RPL36AP83881 106 aaKnown RBP3.06□□□□□ -1.92
TOP2A-202ENST00000577541 ID2Q02363 134 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 CCNIQ14094 377 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 GBX1Q14549 363 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 NFATC4Q14934 902 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 CNN3Q15417 329 aaKnown RBP3.06□□□□□ -1.92
TOP2A-202ENST00000577541 C4orf46Q504U0 113 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 PLA1AQ53H76 456 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 RNASE12Q5GAN4 147 aaKnown RBP3.06□□□□□ -1.92
TOP2A-202ENST00000577541 DCAF12L1Q5VU92 463 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 SRGAP1Q7Z6B7 1085 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 COL23A1Q86Y22 540 aaPredicted RBP3.06□□□□□ -1.92
TOP2A-202ENST00000577541 CHPFQ8IZ52 775 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 LRRC71Q8N4P6 559 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 TERB1Q8NA31 727 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 OR56A3Q8NH54 315 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.06□□□□□ -1.92
TOP2A-202ENST00000577541 BPIFB1Q8TDL5 484 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 SPSB4Q96A44 273 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 R3HDM4Q96D70 268 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 ZFYVE19Q96K21 471 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 PRR25Q96S07 402 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 MS4A7Q9GZW8 240 aaPredicted RBP3.06□□□□□ -1.92
TOP2A-202ENST00000577541 CAPN11Q9UMQ6 739 aa3.06□□□□□ -1.92
TOP2A-202ENST00000577541 TCRBV5S1A1TA0A578 114 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 BTBD19C9JJ37 291 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 CD3EAPO15446 510 aaKnown RBP3.05□□□□□ -1.92
TOP2A-202ENST00000577541 TBC1D4O60343 1298 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 RPL17P18621 184 aaKnown RBP3.05□□□□□ -1.92
TOP2A-202ENST00000577541 ADORA2AP29274 412 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 CDC25AP30304 524 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 TAF6P49848 677 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 POLD3Q15054 466 aaPredicted RBP3.05□□□□□ -1.92
TOP2A-202ENST00000577541 INSCQ1MX18 579 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 DEPDC1Q5TB30 811 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 SERPINA13PQ6UXR4 307 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 CAND1Q86VP6 1230 aaKnown RBP3.05□□□□□ -1.92
TOP2A-202ENST00000577541 ANKRD13BQ86YJ7 626 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 RAB11FIP4Q86YS3 637 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 IGFBPL1Q8WX77 278 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 ZNF668Q96K58 619 aaPredicted RBP3.05□□□□□ -1.92
TOP2A-202ENST00000577541 LRGUKQ96M69 825 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 PPP1R9BQ96SB3 815 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 VN1R3Q9BXE9 311 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 FAM83DQ9H4H8 585 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 ZBTB40Q9NUA8 1239 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 COL20A1Q9P218 1284 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 AFF4Q9UHB7 1163 aaKnown RBP3.05□□□□□ -1.92
TOP2A-202ENST00000577541 EID1Q9Y6B2 187 aa3.05□□□□□ -1.92
TOP2A-202ENST00000577541 USP19O94966 1318 aa3.04□□□□□ -1.92
TOP2A-202ENST00000577541 LOC102723971A0A1B0GUV8 181 aa3.04□□□□□ -1.92
TOP2A-202ENST00000577541 PYCARD-AS1I3L0S3 204 aa3.04□□□□□ -1.92
TOP2A-202ENST00000577541 TSPAN6O43657 245 aa3.04□□□□□ -1.92
TOP2A-202ENST00000577541 MARCH6O60337 910 aa3.04□□□□□ -1.92
TOP2A-202ENST00000577541 EXOC3O60645 756 aa3.04□□□□□ -1.92
TOP2A-202ENST00000577541 CNOT3O75175 753 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms