RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 HEY1Q9Y5J3 304 aa19.81■□□□□ 0.76
SCARF1-206ENST00000573852 KITP10721 976 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 GPD1P21695 349 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 PRKCHP24723 683 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 AP1B1Q10567 949 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 CBLBQ13191 982 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 TEX44Q53QW1 395 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 FAM47CQ5HY64 1035 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 TRIM50Q86XT4 487 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 KBTBD2Q8IY47 623 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.8■□□□□ 0.76
SCARF1-206ENST00000573852 TMEM176AQ96HP8 235 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 CNPY3Q9BT09 278 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 C20orf27Q9GZN8 174 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 KRT82Q9NSB4 513 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 GPATCH2LQ9NWQ4 482 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 SIRPGQ9P1W8 387 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 MARCOQ9UEW3 520 aaPredicted RBP19.8■□□□□ 0.76
SCARF1-206ENST00000573852 C2CD4BA6NLJ0 364 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 ZBTB42B2RXF5 422 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 CILPO75339 1184 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 GRAP2O75791 330 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 CSH1P0DML2 217 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 CSH2P0DML3 217 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 SKIP12755 728 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 PDGFRAP16234 1089 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 OSBPP22059 807 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 TMPRSS6Q8IU80 811 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 CCDC110Q8TBZ0 833 aa19.8■□□□□ 0.76
SCARF1-206ENST00000573852 HMGCRP04035 888 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 APRTP07741 180 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 CCNFP41002 786 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 MXD4Q14582 209 aaPredicted RBP19.79■□□□□ 0.76
SCARF1-206ENST00000573852 SMC1BQ8NDV3 1235 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 SEPT1Q8WYJ6 367 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 CLPTM1LQ96KA5 538 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 ZNF212Q9UDV6 495 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 A8MXQ7 604 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 MAGEC1O60732 1142 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 ITGB3P05106 788 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 ERFP50548 548 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 LY6KQ17RY6 165 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 DCAF15Q66K64 600 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 ATG16L1Q676U5 607 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 OR52E8Q6IFG1 317 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 EEPD1Q7L9B9 569 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 NUDCD3Q8IVD9 361 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 PQLC3Q8N755 202 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 SPDYE1Q8NFV5 336 aaPredicted RBP19.79■□□□□ 0.76
SCARF1-206ENST00000573852 RTP4Q96DX8 246 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 ETNK2Q9NVF9 386 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 PLA2G4CQ9UP65 541 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 HMX2A2RU54 273 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 SLC15A5A6NIM6 579 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 C19orf81C9J6K1 198 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 INO80B-WBP1J3KQ70 363 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 ACKR2O00590 384 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 TRDMT1O14717 391 aaKnown RBP19.79■□□□□ 0.76
SCARF1-206ENST00000573852 PRPSAP2O60256 369 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 AQP5P55064 265 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 KDSRQ06136 332 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 KRT81Q14533 505 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 TMEM132AQ24JP5 1023 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 THEMIS2Q5TEJ8 643 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 TRMT10BQ6PF06 316 aaKnown RBP19.79■□□□□ 0.76
SCARF1-206ENST00000573852 UNC5AQ6ZN44 842 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 TRIM42Q8IWZ5 723 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 ARHGAP24Q8N264 748 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 HEXIM2Q96MH2 286 aaKnown RBP19.79■□□□□ 0.76
SCARF1-206ENST00000573852 NLRP4Q96MN2 994 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 INO80BQ9C086 356 aaPredicted RBP19.79■□□□□ 0.76
SCARF1-206ENST00000573852 CDT1Q9H211 546 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 HOXC10Q9NYD6 342 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 ASB3Q9Y575 518 aa19.79■□□□□ 0.76
SCARF1-206ENST00000573852 TOP3BO95985 862 aaKnown RBP19.78■□□□□ 0.76
SCARF1-206ENST00000573852 APOEP02649 317 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 CYP3A5P20815 502 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 MAP1SQ66K74 1059 aaPredicted RBP19.78■□□□□ 0.76
SCARF1-206ENST00000573852 OR6B2Q6IFH4 312 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 FAM183BPQ6ZVS7 135 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 TRAPPC12Q8WVT3 735 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 ZBTB10Q96DT7 871 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 RPF1Q9H9Y2 349 aaKnown RBP19.78■□□□□ 0.76
SCARF1-206ENST00000573852 SPATS2LQ9NUQ6 558 aaKnown RBP19.78■□□□□ 0.76
SCARF1-206ENST00000573852 PCMTD2Q9NV79 361 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 DCAF8L1A6NGE4 600 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 ZBED1O96006 694 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 SATB1Q01826 763 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 LGSNQ5TDP6 509 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 SCYL2Q6P3W7 929 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 PPFIBP2Q8ND30 876 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 PHC3Q8NDX5 983 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 FRMD8Q9BZ67 464 aaPredicted RBP19.78■□□□□ 0.76
SCARF1-206ENST00000573852 WWP1Q9H0M0 922 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 FZD8Q9H461 694 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 MINDY3Q9H8M7 445 aa19.78■□□□□ 0.76
SCARF1-206ENST00000573852 IGKV6-21A0A0C4DH24 114 aa19.77■□□□□ 0.76
SCARF1-206ENST00000573852 LACTBL1A8MY62 500 aa19.77■□□□□ 0.76
SCARF1-206ENST00000573852 MAP3K7O43318 606 aa19.77■□□□□ 0.76
SCARF1-206ENST00000573852 BCAR1P56945 870 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms