RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 DMWDQ09019 674 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 KLHL30Q0D2K2 578 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 PPP2R5DQ14738 602 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 ARID5BQ14865 1188 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 LPAL2Q16609 132 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 MEA1Q16626 185 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 SGO2Q562F6 1265 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 NAIF1Q69YI7 327 aaPredicted RBP12.49□□□□□ -0.41
NDE1-206ENST00000572967 DPY19L2P1Q6NXN4 242 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 CC2D1AQ6P1N0 951 aaPredicted RBP12.49□□□□□ -0.41
NDE1-206ENST00000572967 C1orf228Q6PIY5 440 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 VSTM1Q6UX27 236 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 MON1AQ86VX9 555 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 UBR7Q8N806 425 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 SUMF1Q8NBK3 374 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 ZBTB44Q8NCP5 570 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 B3GALNT2Q8NCR0 500 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 MYCBPAPQ8TBZ2 947 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 KAT5Q92993 513 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 CHFRQ96EP1 664 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 TMEM176AQ96HP8 235 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 MYRFLQ96LU7 910 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 PDCL3Q9H2J4 239 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 DEF6Q9H4E7 631 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 LUC7LQ9NQ29 371 aaKnown RBP12.49□□□□□ -0.41
NDE1-206ENST00000572967 GKN1Q9NS71 199 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 TMEM30AQ9NV96 361 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 C2orf42Q9NWW7 574 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 AIPL1Q9NZN9 384 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 WNT6Q9Y6F9 365 aa12.49□□□□□ -0.41
NDE1-206ENST00000572967 FOXN3O00409 490 aaPredicted RBP12.48□□□□□ -0.41
NDE1-206ENST00000572967 LILRB5O75023 590 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 SERPING1P05155 500 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 USP17L7P0C7H9 530 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 VDRP11473 427 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 GNA15P30679 374 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 HOXC13P31276 330 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 PRKCIP41743 596 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 ZNF132P52740 706 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 MLLT6P55198 1093 aaPredicted RBP12.48□□□□□ -0.41
NDE1-206ENST00000572967 CDH8P55286 799 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 CDK17Q00537 523 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 APBA1Q02410 837 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 ORC1Q13415 861 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 RUNX3Q13761 415 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 CCINQ13939 588 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 ZNF268Q14587 947 aaPredicted RBP12.48□□□□□ -0.41
NDE1-206ENST00000572967 HEATR6Q6AI08 1181 aaKnown RBP12.48□□□□□ -0.41
NDE1-206ENST00000572967 PKN3Q6P5Z2 889 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 TRIM72Q6ZMU5 477 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 PRR23BQ6ZRT6 265 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 DENND5BQ6ZUT9 1274 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 FAM35AQ86V20 835 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 TXLNBQ8N3L3 684 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 MSANTD4Q8NCY6 345 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 SH3RF2Q8TEC5 729 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 RUBCNQ92622 972 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 SPATA17Q96L03 361 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 HEXIM2Q96MH2 286 aaKnown RBP12.48□□□□□ -0.41
NDE1-206ENST00000572967 PPP1R9BQ96SB3 815 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 CYP2S1Q96SQ9 504 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 FAM83CQ9BQN1 747 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 ELOVL4Q9GZR5 314 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 SDCBP2Q9H190 292 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 EPC1Q9H2F5 836 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 HESX1Q9UBX0 185 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 HMGXB4Q9UGU5 601 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 FAM186AA6NE01 2351 aa12.48□□□□□ -0.41
NDE1-206ENST00000572967 SSU72P8A0A1W2PR75 194 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 CHURC1-FNTBB4DL54 471 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 SCAMP3O14828 347 aaKnown RBP12.47□□□□□ -0.41
NDE1-206ENST00000572967 CYP26A1O43174 497 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 THAP12O43422 761 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 ABL1P00519 1130 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 PTPN1P18031 435 aaKnown RBP12.47□□□□□ -0.41
NDE1-206ENST00000572967 CXCL12P48061 93 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 IFNAR2P48551 515 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 FNTBP49356 437 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 SNX16P57768 344 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 ARID5AQ03989 594 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 SRSF5Q13243 272 aaKnown RBP12.47□□□□□ -0.41
NDE1-206ENST00000572967 DGKKQ5KSL6 1271 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 FSTL4Q6MZW2 842 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 TMTC1Q8IUR5 882 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 CRYBG2Q8N1P7 616 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 SPEM1Q8N4L4 309 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 CPA6Q8N4T0 437 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 NELL1Q92832 810 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 NOX5Q96PH1 765 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 MED10Q9BTT4 135 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 B3GNT5Q9BYG0 378 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 MIS12Q9H081 205 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 KRT82Q9NSB4 513 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 DUS2Q9NX74 493 aaKnown RBP12.47□□□□□ -0.41
NDE1-206ENST00000572967 VPS13AQ96RL7 3174 aa12.47□□□□□ -0.41
NDE1-206ENST00000572967 LSM8O95777 96 aaKnown RBP12.46□□□□□ -0.41
NDE1-206ENST00000572967 EGFP01133 1207 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 CCDC130P13994 396 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 CYP11B1P15538 503 aa12.46□□□□□ -0.41
NDE1-206ENST00000572967 CYLC1P35663 651 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms