RNA–Protein interactions for RNA: ENST00000572585.5

ABR-218, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 3,776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-218ENST00000572585 DCUN1D5Q9BTE7 237 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 GID8Q9NWU2 228 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 IVNS1ABPQ9Y6Y0 642 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 LAMB1P07942 1786 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 COL5A2P05997 1499 aaPredicted RBP12.14□□□□□ -0.47
ABR-218ENST00000572585 hCG_1818297A0A087WSY0 165 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 P4HBP07237 508 aaKnown RBP12.14□□□□□ -0.47
ABR-218ENST00000572585 NOVP48745 357 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 GCNT1Q02742 428 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 BTG3Q14201 252 aaPredicted RBP12.14□□□□□ -0.47
ABR-218ENST00000572585 RNF111Q6ZNA4 994 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 RFX6Q8HWS3 928 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 TMEM126BQ8IUX1 230 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 NAT8LQ8N9F0 302 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 CYP2W1Q8TAV3 490 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 RMND5BQ96G75 393 aaPredicted RBP12.14□□□□□ -0.47
ABR-218ENST00000572585 CSRNP1Q96S65 589 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 FERMT1Q9BQL6 677 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 LXNQ9BS40 222 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 LIN28AQ9H9Z2 209 aaKnown RBP12.14□□□□□ -0.47
ABR-218ENST00000572585 ZC3H7BQ9UGR2 993 aaKnown RBP12.14□□□□□ -0.47
ABR-218ENST00000572585 FARP1Q9Y4F1 1045 aaPredicted RBP12.14□□□□□ -0.47
ABR-218ENST00000572585 MYOCOSA0A1B0GUC4 107 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 CYB561D2O14569 222 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 CST8O60676 142 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 CDH3P22223 829 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 STT3AP46977 705 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 GAD2Q05329 585 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 CEP55Q53EZ4 464 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 FASTKD1Q53R41 847 aaKnown RBP12.14□□□□□ -0.47
ABR-218ENST00000572585 OTOP1Q7RTM1 612 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 TRIM50Q86XT4 487 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 SCAIQ8N9R8 606 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 SLC35B4Q969S0 331 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 LENG9Q96B70 501 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 ACSF2Q96CM8 615 aaPredicted RBP12.14□□□□□ -0.47
ABR-218ENST00000572585 VPS45Q9NRW7 570 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 TRIM17Q9Y577 477 aa12.14□□□□□ -0.47
ABR-218ENST00000572585 TRPM3Q9HCF6 1732 aaPredicted RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 XPOTO43592 962 aaKnown RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 MAPTP10636 758 aaKnown RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 RBP3P10745 1247 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 COX4I1P13073 169 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 ITGAXP20702 1163 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 SLC1A6P48664 564 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 SERPINB9P50453 376 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 RWDD4Q6NW29 188 aaKnown RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 BNC2Q6ZN30 1099 aaPredicted RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 ARMCX6Q7L4S7 300 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 DCAF4Q8WV16 495 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 ARHGEF1Q92888 912 aaKnown RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 ITPKCQ96DU7 683 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 FIZ1Q96SL8 496 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 HNRNPABQ99729 332 aaKnown RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 ZNF577Q9BSK1 485 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 PI4K2AQ9BTU6 479 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 PRPF19Q9UMS4 504 aaKnown RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 E7ESA3 106 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 THRAP10827 490 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 GNA15P30679 374 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 NUDT2P50583 147 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 EIF3EP60228 445 aaKnown RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 SNAP25P60880 206 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 PSMC5P62195 406 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 BMPR2Q13873 1038 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 DARS2Q6PI48 645 aaKnown RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 MON1BQ7L1V2 547 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 TRMT1LQ7Z2T5 733 aaKnown RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 TMEM110Q86TL2 294 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 POMGNT1Q8WZA1 660 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 DLG3Q92796 817 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 GJD4Q96KN9 370 aaPredicted RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 DHX33Q9H6R0 707 aaKnown RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 IGSF9Q9P2J2 1179 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 STK39Q9UEW8 545 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 ZNHIT2Q9UHR6 403 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 SLC16A4O15374 487 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 GRIN3BO60391 1043 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 CALB1P05937 261 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 ADRB2P07550 413 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 C1QBPQ07021 282 aaKnown RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 ATP1A4Q13733 1029 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 APOFQ13790 326 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 PDK1Q15118 436 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 GRIK5Q16478 980 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 TBC1D10BQ4KMP7 808 aaPredicted RBP12.13□□□□□ -0.47
ABR-218ENST00000572585 MFSD14BQ5SR56 506 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 MFSD4BQ5TF39 518 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 CDHR3Q6ZTQ4 885 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 FAM71DQ8N9W8 422 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 AP4S1Q9Y587 144 aa12.13□□□□□ -0.47
ABR-218ENST00000572585 DDX39AO00148 427 aaKnown RBP12.12□□□□□ -0.47
ABR-218ENST00000572585 DCXO43602 365 aa12.12□□□□□ -0.47
ABR-218ENST00000572585 ZC3H11AO75152 810 aaKnown RBP eCLIP12.12□□□□□ -0.47
ABR-218ENST00000572585 ZMPSTE24O75844 475 aa12.12□□□□□ -0.47
ABR-218ENST00000572585 CFBP00751 764 aa12.12□□□□□ -0.47
ABR-218ENST00000572585 GYS1P13807 737 aa12.12□□□□□ -0.47
ABR-218ENST00000572585 PHKA2P46019 1235 aa12.12□□□□□ -0.47
ABR-218ENST00000572585 PEX3P56589 373 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms