RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 CCDC172P0C7W6 258 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 CTHP32929 405 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 RPS9P46781 194 aaKnown RBP14.64□□□□□ -0.07
RPAIN-211ENST00000572174 KCNMA1Q12791 1236 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 DRAP1Q14919 205 aaPredicted RBP14.64□□□□□ -0.07
RPAIN-211ENST00000572174 ZSCAN23Q3MJ62 389 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 BTBD8Q5XKL5 378 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 GJB7Q6PEY0 223 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 DHX40Q8IX18 779 aaKnown RBP14.64□□□□□ -0.07
RPAIN-211ENST00000572174 IPO4Q8TEX9 1081 aaKnown RBP14.64□□□□□ -0.07
RPAIN-211ENST00000572174 ULBP1Q9BZM6 244 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 DCLK3Q9C098 648 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 RNF38Q9H0F5 515 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 LHX5Q9H2C1 402 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 PDCL3Q9H2J4 239 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 ST7Q9NRC1 585 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 SMPD4Q9NXE4 827 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 CFAP97Q9P2B7 532 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 FHOD1Q9Y613 1164 aa14.64□□□□□ -0.07
RPAIN-211ENST00000572174 F8VZ95 297 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 COL9A1P20849 921 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 GPD2P43304 727 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 PPP2R5DQ14738 602 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 EML3Q32P44 896 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 DGKKQ5KSL6 1271 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 ZNF677Q86XU0 584 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 GPIHBP1Q8IV16 184 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 CCDC105Q8IYK2 499 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 SYNPOQ8N3V7 929 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 ZFYVE19Q96K21 471 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 LRRC3BQ96PB8 259 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 EBF3Q9H4W6 596 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 ECT2Q9H8V3 914 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 FAM207AQ9NSI2 230 aaPredicted RBP14.63□□□□□ -0.07
RPAIN-211ENST00000572174 GTSE1Q9NYZ3 720 aa14.63□□□□□ -0.07
RPAIN-211ENST00000572174 COL4A3Q01955 1670 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 FAM170BA6NMN3 283 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 FOXN3O00409 490 aaPredicted RBP14.62□□□□□ -0.07
RPAIN-211ENST00000572174 GALR2O43603 387 aaPredicted RBP14.62□□□□□ -0.07
RPAIN-211ENST00000572174 LSM8O95777 96 aaKnown RBP14.62□□□□□ -0.07
RPAIN-211ENST00000572174 TPM3P06753 285 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 LCP1P13796 627 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 RPL34P49207 117 aaKnown RBP14.62□□□□□ -0.07
RPAIN-211ENST00000572174 PTPN5P54829 565 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 DAOAP59103 153 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 POLR2FP61218 127 aaKnown RBP14.62□□□□□ -0.07
RPAIN-211ENST00000572174 GRSF1Q12849 480 aaKnown RBP eCLIP14.62□□□□□ -0.07
RPAIN-211ENST00000572174 SYCP1Q15431 976 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 PMF1Q6P1K2 205 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 NUDT18Q6ZVK8 323 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 TMEM105Q8N8V8 129 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 PLD4Q96BZ4 506 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 ZFRQ96KR1 1074 aaKnown RBP14.62□□□□□ -0.07
RPAIN-211ENST00000572174 NAA15Q9BXJ9 866 aaKnown RBP14.62□□□□□ -0.07
RPAIN-211ENST00000572174 SYNCQ9H7C4 482 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 TMEM51Q9NW97 253 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 MARCH2Q9P0N8 246 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 RASAL2Q9UJF2 1139 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 SIK3Q9Y2K2 1263 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 WNT6Q9Y6F9 365 aa14.62□□□□□ -0.07
RPAIN-211ENST00000572174 FANCMQ8IYD8 2048 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 CACNA1IQ9P0X4 2223 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.61□□□□□ -0.07
RPAIN-211ENST00000572174 TULP2O00295 520 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 SERPINC1P01008 464 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 LTFP02788 710 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 CLCN1P35523 988 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 EIF2DP41214 584 aaKnown RBP14.61□□□□□ -0.07
RPAIN-211ENST00000572174 STAT1P42224 750 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 RGS7P49802 495 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 VCPP55072 806 aaKnown RBP14.61□□□□□ -0.07
RPAIN-211ENST00000572174 ZNF445P59923 1031 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 APBA1Q02410 837 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 TNK2Q07912 1038 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 PDCLQ13371 301 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 FBXO43Q4G163 708 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 BSPRYQ5W0U4 402 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 HTR3DQ70Z44 454 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 BEND5Q7L4P6 421 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 CACNA2D4Q7Z3S7 1137 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 SCD5Q86SK9 330 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 ZDHHC17Q8IUH5 632 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 TMEM35BQ8NCS4 154 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 CLDN23Q96B33 292 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 IQCDQ96DY2 449 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 ZSWIM1Q9BR11 485 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 KLF16Q9BXK1 252 aaPredicted RBP14.61□□□□□ -0.07
RPAIN-211ENST00000572174 FOXQ1Q9C009 403 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 GANQ9H2C0 597 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 HSD3B7Q9H2F3 369 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 NMUR1Q9HB89 426 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 HPS4Q9NQG7 708 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 MYO6Q9UM54 1294 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 HBS1LQ9Y450 684 aaKnown RBP14.61□□□□□ -0.07
RPAIN-211ENST00000572174 MUC6Q6W4X9 2439 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 ATG2BQ96BY7 2078 aa14.61□□□□□ -0.07
RPAIN-211ENST00000572174 A0A1W2PQC6 194 aa14.6□□□□□ -0.07
RPAIN-211ENST00000572174 GLI1P08151 1106 aa14.6□□□□□ -0.07
RPAIN-211ENST00000572174 ATP1A3P13637 1013 aa14.6□□□□□ -0.07
RPAIN-211ENST00000572174 ARSAP15289 507 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms