RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 SLC7A1P30825 629 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 MYO1EQ12965 1108 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 RAB32Q13637 225 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 CC2D1BQ5T0F9 858 aaKnown RBP4.91□□□□□ -1.62
NUP88-202ENST00000570937 MAVSQ7Z434 540 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 TTC8Q8TAM2 541 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 ATG4AQ8WYN0 398 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 MAML1Q92585 1016 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 TSR2Q969E8 191 aaKnown RBP4.91□□□□□ -1.62
NUP88-202ENST00000570937 CFAP53Q96M91 514 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 ZNF518BQ9C0D4 1074 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 IL17RBQ9NRM6 502 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 KLHL42Q9P2K6 505 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 DDX20Q9UHI6 824 aaKnown RBP4.91□□□□□ -1.62
NUP88-202ENST00000570937 SERTAD3Q9UJW9 196 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 ARHGEF17Q96PE2 2063 aaPredicted RBP4.91□□□□□ -1.62
NUP88-202ENST00000570937 COL18A1P39060 1754 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 PARD3Q8TEW0 1356 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 NPC1L1Q9UHC9 1359 aa4.91□□□□□ -1.62
NUP88-202ENST00000570937 BCL9O00512 1426 aa4.9□□□□□ -1.62
NUP88-202ENST00000570937 THSD7AQ9UPZ6 1657 aa4.9□□□□□ -1.62
NUP88-202ENST00000570937 LRRC3CA6NJW4 275 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 VSTM5A8MXK1 200 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 TPP1O14773 563 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 TBC1D4O60343 1298 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 CSF1RP07333 972 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 PDHA1P08559 390 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 JUPP14923 745 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 GPD1P21695 349 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 MTHFSP49914 203 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 DGKEP52429 567 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 ATXN1P54253 815 aaKnown RBP4.9□□□□□ -1.63
NUP88-202ENST00000570937 SP2Q02086 613 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 LLGL1Q15334 1064 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 ZIK1Q3SY52 487 aaPredicted RBP4.9□□□□□ -1.63
NUP88-202ENST00000570937 MGAT5BQ3V5L5 792 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 AKNAD1Q5T1N1 836 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 TSTD2Q5T7W7 516 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 RGS7BPQ6MZT1 257 aaPredicted RBP4.9□□□□□ -1.63
NUP88-202ENST00000570937 ANKRD16Q6P6B7 361 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 MICU3Q86XE3 530 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 ZNF280BQ86YH2 543 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 NMD3Q96D46 503 aaKnown RBP4.9□□□□□ -1.63
NUP88-202ENST00000570937 HAPLN3Q96S86 360 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 CPNE5Q9HCH3 593 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 XPNPEP3Q9NQH7 507 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 ARHGEF3Q9NR81 526 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 OBP2AQ9NY56 170 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 TPCN1Q9ULQ1 816 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 ST3GAL5Q9UNP4 418 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 LTN1O94822 1766 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 PCDH11XQ9BZA7 1347 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 PCDH11YQ9BZA8 1340 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 KIF20BQ96Q89 1820 aa4.9□□□□□ -1.63
NUP88-202ENST00000570937 MYOM1P52179 1685 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 TNS2Q63HR2 1409 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 CFAP69A5D8W1 941 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 TRIM43BA6NCK2 446 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 IL6RP08887 468 aaPredicted RBP4.89□□□□□ -1.63
NUP88-202ENST00000570937 DRD4P21917 467 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 ALDH9A1P49189 494 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 CCT8P50990 548 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 PDE6CP51160 858 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 SUMO3P55854 103 aaPredicted RBP4.89□□□□□ -1.63
NUP88-202ENST00000570937 FAM193AP78312 1265 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 EIF2B5Q13144 721 aaKnown RBP4.89□□□□□ -1.63
NUP88-202ENST00000570937 EIF4A2Q14240 407 aaKnown RBP4.89□□□□□ -1.63
NUP88-202ENST00000570937 GRM3Q14832 879 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 POLD3Q15054 466 aaPredicted RBP4.89□□□□□ -1.63
NUP88-202ENST00000570937 CCDC142Q17RM4 750 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 FAM153CQ494X1 144 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 SLC44A4Q53GD3 710 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 PLEKHO1Q53GL0 409 aaPredicted RBP4.89□□□□□ -1.63
NUP88-202ENST00000570937 COLEC12Q5KU26 742 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 RNF220Q5VTB9 566 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 WDR53Q7Z5U6 358 aaPredicted RBP4.89□□□□□ -1.63
NUP88-202ENST00000570937 DEFB132Q7Z7B7 95 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 C14orf80Q86SX3 495 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 FAM156AQ8NDB6 213 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 ZNF384Q8TF68 577 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 LRTOMTQ8WZ04 291 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 TRIM43Q96BQ3 446 aaPredicted RBP4.89□□□□□ -1.63
NUP88-202ENST00000570937 CXorf36Q9H7Y0 433 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 A1CFQ9NQ94 594 aaKnown RBP4.89□□□□□ -1.63
NUP88-202ENST00000570937 STK32BQ9NY57 414 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 ADAM21Q9UKJ8 722 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 NUDCQ9Y266 331 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 FAM208AQ9UK61 1670 aaKnown RBP4.89□□□□□ -1.63
NUP88-202ENST00000570937 PLEKHG2Q9H7P9 1386 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 DISP2A7MBM2 1401 aa4.89□□□□□ -1.63
NUP88-202ENST00000570937 FNDC1Q4ZHG4 1894 aaPredicted RBP4.88□□□□□ -1.63
NUP88-202ENST00000570937 MBD3L4A6NDZ8 208 aaPredicted RBP4.88□□□□□ -1.63
NUP88-202ENST00000570937 MBD3L3A6NE82 208 aaPredicted RBP4.88□□□□□ -1.63
NUP88-202ENST00000570937 hCG_1984214I3L0E3 225 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 GOLIM4O00461 696 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 HSP90AB1P08238 724 aaKnown RBP4.88□□□□□ -1.63
NUP88-202ENST00000570937 MYF5P13349 255 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 NDUFB7P17568 137 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 KCNA3P22001 575 aa4.88□□□□□ -1.63
NUP88-202ENST00000570937 LIPAP38571 399 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms