RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 RNASE1P07998 156 aaKnown RBP6.56□□□□□ -1.36
CAPN3-218ENST00000568153 H2AFZP0C0S5 128 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 FGFR4P22455 802 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 TBXAS1P24557 533 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-218ENST00000568153 HOXA11P31270 313 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-218ENST00000568153 PIK3CAP42336 1068 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 TFAMQ00059 246 aaKnown RBP6.56□□□□□ -1.36
CAPN3-218ENST00000568153 GCNT1Q02742 428 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 TMEM62Q0P6H9 643 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 SLC10A6Q3KNW5 377 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 DCAF4L1Q3SXM0 396 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 H2AFVQ71UI9 128 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 RNF180Q86T96 592 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 CDR2LQ86X02 465 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-218ENST00000568153 CREG2Q8IUH2 290 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 MYRIPQ8NFW9 859 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 OR5B17Q8NGF7 314 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 U2AF1L4Q8WU68 220 aaKnown RBP6.56□□□□□ -1.36
CAPN3-218ENST00000568153 SHC3Q92529 594 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 TAF4BQ92750 862 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 SECISBP2LQ93073 1101 aaKnown RBP6.56□□□□□ -1.36
CAPN3-218ENST00000568153 NOX5Q96PH1 765 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 WDR24Q96S15 920 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 PI4K2AQ9BTU6 479 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 CCDC94Q9BW85 323 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-218ENST00000568153 CELF4Q9BZC1 486 aaKnown RBP6.56□□□□□ -1.36
CAPN3-218ENST00000568153 IMPG2Q9BZV3 1241 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 GPR88Q9GZN0 384 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 KLHL25Q9H0H3 589 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 CHST7Q9NS84 486 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 C1orf112Q9NSG2 853 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 SUSD2Q9UGT4 822 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 DDX20Q9UHI6 824 aaKnown RBP6.56□□□□□ -1.36
CAPN3-218ENST00000568153 INTUQ9ULD6 942 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 PCDHA11Q9Y5I1 949 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 LCTP09848 1927 aa6.56□□□□□ -1.36
CAPN3-218ENST00000568153 BTNL10A8MVZ5 291 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 DDX3XO00571 662 aaKnown RBP eCLIP6.55□□□□□ -1.36
CAPN3-218ENST00000568153 PAX4O43316 350 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 NPTXRO95502 500 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 FTLP02792 175 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-218ENST00000568153 TMEM191BP0C7N4 346 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 PNMA6AP0CW24 399 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-218ENST00000568153 GZMAP12544 262 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 KRT5P13647 590 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 CST5P28325 142 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-218ENST00000568153 HOXC8P31273 242 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 ATICP31939 592 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 CTSKP43235 329 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 MYL6P60660 151 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 RBP5P82980 135 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 CAP1Q01518 475 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 CUL2Q13617 745 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 RAB33AQ14088 237 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 SNX17Q15036 470 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 FXNQ16595 210 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 FAM47CQ5HY64 1035 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 MAP3K21Q5TCX8 1036 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 HEATR6Q6AI08 1181 aaKnown RBP6.55□□□□□ -1.36
CAPN3-218ENST00000568153 CCSAPQ6IQ19 270 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-218ENST00000568153 NOTUMQ6P988 496 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 SLC27A1Q6PCB7 646 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 RPAINQ86UA6 219 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 SESTD1Q86VW0 696 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 RPUSD2Q8IZ73 545 aaKnown RBP6.55□□□□□ -1.36
CAPN3-218ENST00000568153 SLC35F6Q8N357 371 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 ZNF655Q8N720 491 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-218ENST00000568153 ARRDC4Q8NCT1 418 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 TRIM58Q8NG06 486 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 KAT5Q92993 513 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 ARMC5Q96C12 935 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 TCTN2Q96GX1 697 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 FAXDC2Q96IV6 333 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 ALS2CR12Q96Q35 445 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 TSPAN18Q96SJ8 248 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 NAPGQ99747 312 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-218ENST00000568153 ST7Q9NRC1 585 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 SEPT11Q9NVA2 429 aaKnown RBP6.55□□□□□ -1.36
CAPN3-218ENST00000568153 SAGE1Q9NXZ1 904 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 PRR13Q9NZ81 148 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 LMCD1Q9NZU5 365 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 TRIM10Q9UDY6 481 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 TFR2Q9UP52 801 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 DERAQ9Y315 318 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 JRKLQ9Y4A0 524 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 PCDHB4Q9Y5E5 795 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 PCDHB2Q9Y5E7 798 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 TRPM7Q96QT4 1865 aa6.55□□□□□ -1.36
CAPN3-218ENST00000568153 ZNFX1Q9P2E3 1918 aaKnown RBP6.54□□□□□ -1.36
CAPN3-218ENST00000568153 PTPRJQ12913 1337 aa6.54□□□□□ -1.36
CAPN3-218ENST00000568153 MROH7Q68CQ1 1323 aa6.54□□□□□ -1.36
CAPN3-218ENST00000568153 MACROD2A1Z1Q3 448 aa6.54□□□□□ -1.36
CAPN3-218ENST00000568153 ANKRD62A6NC57 917 aa6.54□□□□□ -1.36
CAPN3-218ENST00000568153 RTN2O75298 545 aa6.54□□□□□ -1.36
CAPN3-218ENST00000568153 CLSTN1O94985 981 aa6.54□□□□□ -1.36
CAPN3-218ENST00000568153 SLU7O95391 586 aaKnown RBP6.54□□□□□ -1.36
CAPN3-218ENST00000568153 MOCS3O95396 460 aa6.54□□□□□ -1.36
CAPN3-218ENST00000568153 PAPLNO95428 1278 aa6.54□□□□□ -1.36
CAPN3-218ENST00000568153 GJB6O95452 261 aa6.54□□□□□ -1.36
CAPN3-218ENST00000568153 ASS1P00966 412 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms