RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 POLR1BQ9H9Y6 1135 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 PLEKHA5Q9HAU0 1116 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 TM9SF3Q9HD45 589 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 WDR70Q9NW82 654 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 CHMP5Q9NZZ3 219 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 KCNJ14Q9UNX9 436 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 MTMR6Q9Y217 621 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 RAD54BQ9Y620 910 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 ITGB2P05107 769 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 CKMT2P17540 419 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 RBMS1P29558 406 aaKnown RBP10.36□□□□□ -0.75
CAPN3-216ENST00000567071 GPR15P49685 360 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 TPMTP51580 245 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 LILRA4P59901 499 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 ASIC1P78348 528 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 INSM1Q01101 510 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-216ENST00000567071 SLC10A6Q3KNW5 377 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 SDHAF4Q5VUM1 108 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 MCTP1Q6DN14 999 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 GALNT17Q6IS24 598 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 USP53Q70EK8 1073 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 MIB1Q86YT6 1006 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.36□□□□□ -0.75
CAPN3-216ENST00000567071 PRCCQ92733 491 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-216ENST00000567071 HAS1Q92839 578 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 SIPA1Q96FS4 1042 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 DEPDC7Q96QD5 511 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 ELF4Q99607 663 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-216ENST00000567071 ACE2Q9BYF1 805 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-216ENST00000567071 CD248Q9HCU0 757 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 TRPM5Q9NZQ8 1165 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 PCDHA12Q9UN75 941 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 ZDHHC9Q9Y397 364 aa10.36□□□□□ -0.75
CAPN3-216ENST00000567071 ARHGEF35A5YM69 484 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 HOXC11O43248 304 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-216ENST00000567071 USP12O75317 370 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 ZSCAN22P10073 491 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-216ENST00000567071 XBP1P17861 261 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 POU3F2P20265 443 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-216ENST00000567071 ZNF132P52740 706 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 NUCB2P80303 420 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 FOXK1P85037 733 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 MYL7Q01449 175 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 GRIN1Q05586 938 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 PPP2R3AQ06190 1150 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 DDR2Q16832 855 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 ANO4Q32M45 955 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 KRTAP21-3Q3LHN1 58 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 ARL13BQ3SXY8 428 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 ETFBKMTQ8IXQ9 262 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 FBXO18Q8NFZ0 1043 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 KIFAP3Q92845 792 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 EXTL1Q92935 676 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 CCNL2Q96S94 520 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-216ENST00000567071 ACOX2Q99424 681 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 TARS2Q9BW92 718 aaKnown RBP10.35□□□□□ -0.75
CAPN3-216ENST00000567071 PTPRHQ9HD43 1115 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 CFAP97Q9P2B7 532 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 PCDHB1Q9Y5F3 818 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 CPQQ9Y646 472 aa10.35□□□□□ -0.75
CAPN3-216ENST00000567071 RP1L1Q8IWN7 2480 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-216ENST00000567071 CCDC169A6NNP5 214 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 KCNJ18B7U540 433 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 SCAMP3O14828 347 aaKnown RBP10.34□□□□□ -0.75
CAPN3-216ENST00000567071 SYNCRIPO60506 623 aaKnown RBP10.34□□□□□ -0.75
CAPN3-216ENST00000567071 GJB6O95452 261 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 F13A1P00488 732 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 FAM87AP0C7U9 286 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 CXCL8P10145 99 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 ITGB6P18564 788 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 CYP11B2P19099 503 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 GRIK1P39086 918 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 MATR3P43243 847 aaKnown RBP eCLIP10.34□□□□□ -0.75
CAPN3-216ENST00000567071 ARRB1P49407 418 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-216ENST00000567071 SLC7A9P82251 487 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 SPAG1Q07617 926 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 NCAPHQ15003 741 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 LINC00303Q3SY05 128 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 FOXD4L6Q3SYB3 417 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-216ENST00000567071 FUT11Q495W5 492 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 LAYNQ6UX15 382 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 FOXD4L3Q6VB84 417 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-216ENST00000567071 LRRTM3Q86VH5 581 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 SPATA20Q8TB22 786 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 XPO6Q96QU8 1125 aaKnown RBP10.34□□□□□ -0.75
CAPN3-216ENST00000567071 TSPAN18Q96SJ8 248 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 SLC25A18Q9H1K4 315 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 ABCB6Q9NP58 842 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 ASCL3Q9NQ33 180 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 DNAJC17Q9NVM6 304 aaKnown RBP10.34□□□□□ -0.75
CAPN3-216ENST00000567071 SMPD4Q9NXE4 827 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 EHD2Q9NZN4 543 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-216ENST00000567071 MYH10P35580 1976 aa10.34□□□□□ -0.75
CAPN3-216ENST00000567071 A0A087WWV3 80 aa10.33□□□□□ -0.76
CAPN3-216ENST00000567071 CYB561D2O14569 222 aa10.33□□□□□ -0.76
CAPN3-216ENST00000567071 IGLV3-19P01714 112 aa10.33□□□□□ -0.76
CAPN3-216ENST00000567071 CLTAP09496 248 aa10.33□□□□□ -0.76
CAPN3-216ENST00000567071 CD27P26842 260 aa10.33□□□□□ -0.76
CAPN3-216ENST00000567071 TNFRSF8P28908 595 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms