RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 C8orf48Q96LL4 319 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 CFAP57Q96MR6 1250 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 RNF157Q96PX1 679 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 TRIM51Q9BSJ1 452 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 REPIN1Q9BWE0 567 aaKnown RBP9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 TXLNGYQ9BZA5 131 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 PHACTR1Q9C0D0 580 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 NRDE2Q9H7Z3 1164 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 COMMD8Q9NX08 183 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 GRHL1Q9NZI5 618 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 CACNG4Q9UBN1 327 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 MTRF1LQ9UGC7 380 aaKnown RBP9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 ADAM28Q9UKQ2 775 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 LRFN2Q9ULH4 789 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 R3HDM2Q9Y2K5 976 aaKnown RBP9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 LTBP2Q14767 1821 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 TET1Q8NFU7 2136 aa9.25□□□□□ -0.93
LSM3P5-201ENST00000566307 FNDC1Q4ZHG4 1894 aaPredicted RBP9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 CFAP69A5D8W1 941 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 PI4K2BG5E9Z4 385 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 CLDN5O00501 218 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 TBC1D4O60343 1298 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 BEST1O76090 585 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 ZBED1O96006 694 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 ALDH2P05091 517 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 ITGB1P05556 798 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 ZFXP17010 805 aaPredicted RBP9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 KLRC2P26717 231 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 RDXP35241 583 aaKnown RBP9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 GJC1P36383 396 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 RPL21P46778 160 aaKnown RBP9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 CDH6P55285 790 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 MAP3K7CLP57077 242 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 MRPS25P82663 173 aaKnown RBP9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 KRT17Q04695 432 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 RNASELQ05823 741 aaKnown RBP9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 CALCOCO2Q13137 446 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 DPYSL3Q14195 570 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 HLTFQ14527 1009 aaKnown RBP eCLIP9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 SLMAPQ14BN4 828 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 TRIM60Q495X7 471 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 ZFYVE27Q5T4F4 411 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 CFAP58Q5T655 872 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 ZNF280DQ6N043 979 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 RHBDF2Q6PJF5 856 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 ZDHHC24Q6UX98 284 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 BHLHA9Q7RTU4 235 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 TMC3Q7Z5M5 1100 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 LRRTM3Q86VH5 581 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 RELL1Q8IUW5 271 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 GSPT2Q8IYD1 628 aaKnown RBP9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 GPR65Q8IYL9 337 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 RNF168Q8IYW5 571 aaPredicted RBP9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 DEFB106AQ8N104 65 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 CLEC4CQ8WTT0 213 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 SNF8Q96H20 258 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 FMO2Q99518 471 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 SH3GL2Q99962 352 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 SNRNP25Q9BV90 132 aaKnown RBP9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 HEMGNQ9BXL5 484 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 NEUROG2Q9H2A3 272 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 ZWILCHQ9H900 591 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 PCDH9Q9HC56 1237 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 PCDH18Q9HCL0 1135 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 NGRNQ9NPE2 291 aaKnown RBP9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 IL37Q9NZH6 218 aa9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 TIMM13Q9Y5L4 95 aaPredicted RBP9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 SF3B1O75533 1304 aaKnown RBP eCLIP9.24□□□□□ -0.93
LSM3P5-201ENST00000566307 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 ABHD14A-ACY1A0A1B0GW23 586 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 FAM92AA1XBS5 289 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 H7C4K7 107 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 I3L4J1 428 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 TNFRSF10BO14763 440 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 NRP1O14786 923 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 KIAA0355O15063 1070 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 OPA1O60313 960 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 CST8O60676 142 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 TADA2AO75478 443 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 GRAP2O75791 330 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 LTFP02788 710 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 FYNP06241 537 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 GALTP07902 379 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 CLTBP09497 229 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 FAM153BP0C7A2 387 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 HSPA8P11142 646 aaKnown RBP9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 KRT10P13645 584 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 IL4RP24394 825 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 STIP1P31948 543 aaKnown RBP9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 L1CAMP32004 1257 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 CYP2C18P33260 490 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 TNNT3P45378 269 aaPredicted RBP9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 OR1G1P47890 313 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 KCNJ1P48048 391 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 HCAR3P49019 387 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 NR2C2P49116 596 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 ADCY2Q08462 1091 aa9.23□□□□□ -0.93
LSM3P5-201ENST00000566307 XRCC4Q13426 336 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms