RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 CHPFQ8IZ52 775 aa22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 PDILTQ8N807 584 aa22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 TRIML1Q8N9V2 468 aa22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 XXYLT1Q8NBI6 393 aa22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 IPO4Q8TEX9 1081 aaKnown RBP22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 TNIP3Q96KP6 325 aa22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 HSPA12BQ96MM6 686 aa22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 XPO6Q96QU8 1125 aaKnown RBP22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 GABRG3Q99928 467 aa22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 TRIM9Q9C026 710 aa22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 NACA2Q9H009 215 aa22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 VRTNQ9H8Y1 702 aa22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 DNAJC17Q9NVM6 304 aaKnown RBP22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 KBTBD4Q9NVX7 518 aa22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 GMIPQ9P107 970 aa22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 SUSD2Q9UGT4 822 aa22.6■■□□□ 1.21
RPUSD1-206ENST00000565503 TRIM24O15164 1050 aa22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 GJB3O75712 270 aa22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 CAPNS1P04632 268 aa22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 WASP42768 502 aa22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 CYP2J2P51589 502 aa22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 CUL4AQ13619 759 aa22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 FAM173BQ6P4H8 233 aa22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 PAQR9Q6ZVX9 377 aa22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 ZNF516Q92618 1163 aa22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 ZNF419Q96HQ0 510 aaPredicted RBP22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 MED10Q9BTT4 135 aa22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 CUEDC2Q9H467 287 aa22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 UPF2Q9HAU5 1272 aaKnown RBP22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 MARK1Q9P0L2 795 aa22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 CYP8B1Q9UNU6 501 aa22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 PLXNB3Q9ULL4 1909 aa22.59■■□□□ 1.21
RPUSD1-206ENST00000565503 TLR5O60602 858 aa22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 NDUFS2O75306 463 aa22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 IRF1P10914 325 aa22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 AMPD3Q01432 767 aa22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 TRIP6Q15654 476 aaKnown RBP22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 FAM26FQ5R3K3 315 aa22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 SYCP2LQ5T4T6 812 aa22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 CNNM4Q6P4Q7 775 aa22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 OR2I1PQ8NGU4 316 aa22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 SCFD1Q8WVM8 642 aa22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 FOXJ1Q92949 421 aa22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 WBP2Q969T9 261 aa22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 GZF1Q9H116 711 aaPredicted RBP22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 FBXO44Q9H4M3 255 aa22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 WDR35Q9P2L0 1181 aa22.58■■□□□ 1.21
RPUSD1-206ENST00000565503 PTPRBP23467 1997 aa22.58■■□□□ 1.2
RPUSD1-206ENST00000565503 APC2O95996 2303 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 LOC400499M0QZD8 3231 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 NEDD8-MDP1E9PL57 170 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 TAF4O00268 1085 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 GFRA2O00451 464 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 CLIC2O15247 247 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 GREM1O60565 184 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 TYRP14679 529 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 GNSP15586 552 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 ASIC1P78348 528 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 E2F4Q16254 413 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 PLEKHG6Q3KR16 790 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 ADAMTS14Q8WXS8 1223 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 USP28Q96RU2 1077 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 ACOX2Q99424 681 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 BBS2Q9BXC9 721 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 SMYD3Q9H7B4 428 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 KRT82Q9NSB4 513 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 CGNQ9P2M7 1197 aaKnown RBP22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 PCDHB9Q9Y5E1 797 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 IGSF10Q6WRI0 2623 aa22.57■■□□□ 1.2
RPUSD1-206ENST00000565503 SH3BP5O60239 455 aa22.56■■□□□ 1.2
RPUSD1-206ENST00000565503 PHACTR2O75167 634 aa22.56■■□□□ 1.2
RPUSD1-206ENST00000565503 AP1G2O75843 785 aa22.56■■□□□ 1.2
RPUSD1-206ENST00000565503 GOLGA8FQ08AF8 430 aa22.56■■□□□ 1.2
RPUSD1-206ENST00000565503 GOLGA8DPQ0D2H9 430 aa22.56■■□□□ 1.2
RPUSD1-206ENST00000565503 WDR45BQ5MNZ6 344 aa22.56■■□□□ 1.2
RPUSD1-206ENST00000565503 C12orf56Q8IXR9 622 aa22.56■■□□□ 1.2
RPUSD1-206ENST00000565503 RGL4Q8IZJ4 473 aa22.56■■□□□ 1.2
RPUSD1-206ENST00000565503 FUKQ8N0W3 1084 aa22.56■■□□□ 1.2
RPUSD1-206ENST00000565503 KLF16Q9BXK1 252 aaPredicted RBP22.56■■□□□ 1.2
RPUSD1-206ENST00000565503 ZDHHC5Q9C0B5 715 aa22.56■■□□□ 1.2
RPUSD1-206ENST00000565503 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.56■■□□□ 1.22e-6■■■■■ 96.1
RPUSD1-206ENST00000565503 TLR8Q9NR97 1041 aaKnown RBP22.56■■□□□ 1.2
RPUSD1-206ENST00000565503 LSM7Q9UK45 103 aaKnown RBP22.56■■□□□ 1.2
RPUSD1-206ENST00000565503 PRRT4C9JH25 899 aa22.55■■□□□ 1.2
RPUSD1-206ENST00000565503 SYT1P21579 422 aa22.55■■□□□ 1.2
RPUSD1-206ENST00000565503 AP3M2P53677 418 aa22.55■■□□□ 1.2
RPUSD1-206ENST00000565503 CDH8P55286 799 aa22.55■■□□□ 1.2
RPUSD1-206ENST00000565503 ZNF699Q32M78 642 aa22.55■■□□□ 1.2
RPUSD1-206ENST00000565503 ZNF667Q5HYK9 610 aa22.55■■□□□ 1.2
RPUSD1-206ENST00000565503 MRGPRX1Q96LB2 322 aa22.55■■□□□ 1.2
RPUSD1-206ENST00000565503 CAMK1GQ96NX5 476 aa22.55■■□□□ 1.2
RPUSD1-206ENST00000565503 CSNK1G1Q9HCP0 422 aa22.55■■□□□ 1.2
RPUSD1-206ENST00000565503 CYLDQ9NQC7 956 aa22.55■■□□□ 1.2
RPUSD1-206ENST00000565503 NFE2L3Q9Y4A8 694 aa22.55■■□□□ 1.2
RPUSD1-206ENST00000565503 KNL1Q8NG31 2342 aa22.54■■□□□ 1.2
RPUSD1-206ENST00000565503 FTH1P19P0C7X4 201 aa22.54■■□□□ 1.2
RPUSD1-206ENST00000565503 NASPP49321 788 aaPredicted RBP22.54■■□□□ 1.2
RPUSD1-206ENST00000565503 DGKGP49619 791 aa22.54■■□□□ 1.2
RPUSD1-206ENST00000565503 SCAPQ12770 1279 aa22.54■■□□□ 1.2
RPUSD1-206ENST00000565503 METTL3Q86U44 580 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms